Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr20g00006 TTTGAGGACTGGAAATCAGAGTCATCTTTTAGTATAGAACAAGAAGATTCTATTAACTATGGAAATCACAAAAGAAAAGTTAGACCAAGTGTGAGTGCTGTTTTGAAGAGTATAGGAAGAAGGCTGGAGGGTGGATCAGAGAAGATGAAGAACTTGAAGAGAGCTTCAGCTGTTCATCCTGTAAGTGATGGACAGAAAAAGCTGCCACCTAAGAAGAAAATTCTTGATCCACAGGGTCCAATCCTTCAGAAATGGAACAAAATCTTTGTAATAACGTGTGTGATGGCAGTCTCTGTGGACCCCCTCTTCTTTTACATTCCAGTGATTGATGTTGATAGAAAATGCCTTGATTTGGATGGAGCATTGCAGATCATTGCCAGTGTTCTCCGTACCTTCTTTGACCTATTCTACATTCTTCACATAATCTTTCAGTTCAAGACAGGGTTCCTTGCCCCTTCTTCTCTTGTTTTTGGAAGGGGTGAACTCATTGATGATCCTGTGGCTATAATGAAAAGATACTTAACTTCATACTTCATCATTGATATTTTATCAATTATTCCACTTCCACAGGTGATTGTTTTAGCCATAAATCCAAACCTGAAAATATCAAATCCATTTGTAGCAAAAGATTTGCTCAAGTATACAGTATTAATCCAGTATGTGCCAAGGCTTTGGCGGATCTATCCACTATTCAAAGAAGTGACAAGAACTTCTGGCATATTGACTGAGACAGCATTGGCTGGAGCTGCTTTTAATCTTTTTCTCTATATGCTAGCAAGTCACGTAGTTGGAGCTAACTGGTATATGCTTTCGGTAGAGTCAGAGTTGCGATGCTGGCGCAGAGAGTTGAGTAATGCTCCAGTCTTTCATCAAGAATACTTGAGTTGTGTAGGCCACAATCCAAATGTCTCTTCACTTCTCAAACAAGCTTGTTCTTTAGTTGACCCTGATCAAATCACAGACGCGAACACCTTCAATTTTGGAATATTTTTTGATGCTCTAGATTCAGGTGTGGTAGAATCAAAAACAGATTTTCCTCAGAAGTTCTTCTACTGCTTTTGGTGGGGTTTGCGCAATTTAAGTTCTGTTGGACAAAATCTCAAGACAAGTACTTATGTCACAGAGATAGCCTTTGCAATCTTCATTGCCATCTTTGGATTGGTTTTATTCTCGTTACTTATTGGAAACATGCAGACATATCTGCAATCTACAACTGTTAGAGAGGAACAGATGAGAGTGAAGAGACAGGATGCAGAACAGTGGATGTCCCACCGTATGCTACCTGAGAACTTGAAGGAAAGAATTAGACGGTATGAACAGTATCAATGGCAAGAAAATAGGGGTGTTGAGGAGGAGGCATTAATTTGTAACCTTCCTAAAGATCTCAGAAGGGACATAAAGCGTCACCTTTGCTTAGCTTTAGTTAAAAACGTGCCATTGTTTAAGAAAATGGATGAGCAGTTGTTGGATGCAATTTGCGATAGACTGAAGCCAGTTCTTTATACTGAAAAGAGCTACATTGTTCGTGAAGGAGATCCAGTTGATGAGATGCTTTTCATTATGCGTGGAAAAGTTTCTACTATGACAACAAATGGTGGAAGAACTGGTTTCTTCAACTCCTTGTTTCTCAAGGCTGGTGATTTCTGCGGAGAGGAGCTTCTGACATGGGCCTTGGATCCCAACTCCTCCTCAAATCTACCCATTTCAACTAGGACTGTAGAAACTATATCAGAAGTTGAAGCCTTTGCTCTCATGGCTGATGACCTGAAGGTTGTTGCTTCTCAATTTCGACGTCTTCAAAGCAAACAGCTCCAACACGCTTTCAGGCAAGGCTTGATATGGAAGACATGGGCTGCCTGTTTCATACAAGCAGCGTGGCGTCGATACTGGAAAAAGAAGATTGAGAGGTCATTGTACGAAGCACAAGACAAGCTACAAGATGCTTTGGCCGATGAGGAAGGATCTACTCTAAGCCTCGGTGCAACCGTATATGCATCAAGGTTTGCTGCCAATGCACTGCGAACCTTGAGAGAAAATAGCAGACACAGTAGAATGCAACAGAGACTACTACCTCTATTACCTACAAAGCCAACTGAGCCAGATTTCACTGATCAGAAACAC 2121 0.4097 FEDWKSESSFSIEQEDSINYGNHKRKVRPSVSAVLKSIGRRLEGGSEKMKNLKRASAVHPVSDGQKKLPPKKKILDPQGPILQKWNKIFVITCVMAVSVDPLFFYIPVIDVDRKCLDLDGALQIIASVLRTFFDLFYILHIIFQFKTGFLAPSSLVFGRGELIDDPVAIMKRYLTSYFIIDILSIIPLPQVIVLAINPNLKISNPFVAKDLLKYTVLIQYVPRLWRIYPLFKEVTRTSGILTETALAGAAFNLFLYMLASHVVGANWYMLSVESELRCWRRELSNAPVFHQEYLSCVGHNPNVSSLLKQACSLVDPDQITDANTFNFGIFFDALDSGVVESKTDFPQKFFYCFWWGLRNLSSVGQNLKTSTYVTEIAFAIFIAIFGLVLFSLLIGNMQTYLQSTTVREEQMRVKRQDAEQWMSHRMLPENLKERIRRYEQYQWQENRGVEEEALICNLPKDLRRDIKRHLCLALVKNVPLFKKMDEQLLDAICDRLKPVLYTEKSYIVREGDPVDEMLFIMRGKVSTMTTNGGRTGFFNSLFLKAGDFCGEELLTWALDPNSSSNLPISTRTVETISEVEAFALMADDLKVVASQFRRLQSKQLQHAFRQGLIWKTWAACFIQAAWRRYWKKKIERSLYEAQDKLQDALADEEGSTLSLGATVYASRFAANALRTLRENSRHSRMQQRLLPLLPTKPTEPDFTDQKH 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr20g00006 707 Gene3D Helix hairpin bin 406 471 - -
Mupr20g00006 707 Gene3D Jelly Rolls 478 598 IPR014710 -
Mupr20g00006 707 SMART cnmp_10 480 611 IPR000595 -
Mupr20g00006 707 CDD CAP_ED 480 609 IPR000595 -
Mupr20g00006 707 SUPERFAMILY cAMP-binding domain-like 407 604 IPR018490 -
Mupr20g00006 707 Pfam Ion transport protein 85 408 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mupr20g00006 707 MobiDBLite consensus disorder prediction 680 707 - -
Mupr20g00006 707 FunFam Cyclic nucleotide-gated ion channel 1 478 596 - -
Mupr20g00006 707 Coils Coil 631 651 - -
Mupr20g00006 707 Gene3D - 87 404 - -
Mupr20g00006 707 Pfam Cyclic nucleotide-binding domain 500 590 IPR000595 -
Mupr20g00006 707 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 61 702 - -
Mupr20g00006 707 ProSiteProfiles cAMP/cGMP binding motif profile. 480 564 IPR000595 -
Mupr20g00006 707 SUPERFAMILY Voltage-gated potassium channels 76 402 - -
Mupr20g00006 707 FunFam Cyclic nucleotide-gated ion channel 1 407 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr20g00006 Mupr-Chr20 35611 39318 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr20g00006 1 703 Ion Channels AT5G53130 63.904 0.0 905
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr20g00006 K05391 - gmx:100797784 1204.5