Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr20g00004 ATGGAGCAGAACAGAAGCAACAAGATGTACAACCTGTTCGTGAAGCACTTGGATGGGAAAACCCTAACCCTGTTATTCCCGTCTCCGATTCTGTACGCGAATGCCATAAAGGATAGGCTGTTCGATCTGACCGGAATTCCCGCGCAGCACCAGCGGCTGGTGACGGGAAGCCGGCAGCTGAACGATGAGAAATCGGCGATCGAATGCTCCTCGGAGGACGGCAACATGTTCCCGTCGGTGCGGCTGCTGCTGCGGCTGAAGGGCGGGAAGGGAGGGTTCGGGTCGCTGCTGCGCGGTGCGGCGACGAAGGCGGGGCAGAAGAAGACAAACAATTTCGATGCATGCCGGGATATGAGTGGGCGGAGGCTGAGGCACGTGAACGCCGAGAAGAGGTTGGAAGAGTGGAAGGCTGGGGAAGAGGAAAGAAGGCTCGAAAAGGTGGCTGAGGACTTTCTCAAGAAACAGATGAAAAAGGTTAAGGTTAAGGGTAAGACTGAAGGTGATGGCGAGGCCCACAAATACGTCGCTAAATATAGGGAGGATTCTGAGCGTTGCGTTGCCGAGGTTGCCTTGTCCGTTAAGGAGGCTCTCACTGCCAAGCGCAAGACCCCTTCACAACCCCACAATGATGCCAAGAAGATGGGAAAGAGGAAATTGAATGAAAGTGACAGTGATGCTGATTCTGATCTAGAGAAATCGGATTTGTTGGATGGCCAGAATGAGTCTGGCTCAAATAACGCTGAGGGTAGTTTGGGTTCGGTAACTGGGGGTTCTGGCTCGTGTGAAACTGTGTCTGAAGAGGAGAAGGAAACAGTTGAATCTGTTGGGTTGCTGAGTACTGAAAGTATTCAGGCCGTGATAAGCGATGGGGCTACTGCAATGCCAAAGGACCCGGTGGTTGCTGGACTTAATGTTGAAGATAATGGATATCATGATTGCCATGGAGCTGTGTCTGACAAGTTTGAGGGTGCTGTGAATCAAGCCTCAAATATTATGGGCTCTGAAACTGTGGCTACTGCTGGCAAATCTAATCATATGGAAATTGATGGATCTCTTGAGCATAAAGCCGTAGTCAATGAAGAAAGCTTGCCAAGCACTAGTGTTCCTGCCTTGGAGGAGCCCCTGGATTTTGGTGCCTTTAATTCAGCGGCTGAACTTGAGGTTCTTGGCTTGGAAAGGTTGAAGTCTGAACTGCAGTCACGTGGGTTAAAATGTGGAGGTACTTTGCAGGAGCGTGCTGCCAGGCTTTTTCTTTTAAAATCAACTCCCCTGGATAAACTTCCAAAGAAGCTGCTTGCAAAGAATAATAATACCATTACCAGCAGCCAAAGGAAGCTGAACACTTCAATAGCGGCCGGAGCGGCCGCTATAGCGGTGGAGCGGAGCGGTAGCAGAGCGCGACAGAACTTGCGTAGTGGCACAGTTCAATGTTGCGGCTGTAGCGGCCGCTATAGCGGGAAATCGTGGCGGAGTGGGCGCTATTGTCCACATGAAGGGGAAAATGTCTTGCCTTCTCCGACGACCTTCTTCGGCGACCTTCTCCGACGACGCACTGTCCGGTTATCCCACTATCCCGCTATTCCAGTTTGGGGGTCGGTCGTTCCGCTCCGCTATCTGGGATTAACTACTATGCATAGAATTGAGAATGTTGTAAAGAAGAAAGGTAGTAATGGAGAGGGAAAGCCT 1686 0.5113 MEQNRSNKMYNLFVKHLDGKTLTLLFPSPILYANAIKDRLFDLTGIPAQHQRLVTGSRQLNDEKSAIECSSEDGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWKAGEEERRLEKVAEDFLKKQMKKVKVKGKTEGDGEAHKYVAKYREDSERCVAEVALSVKEALTAKRKTPSQPHNDAKKMGKRKLNESDSDADSDLEKSDLLDGQNESGSNNAEGSLGSVTGGSGSCETVSEEEKETVESVGLLSTESIQAVISDGATAMPKDPVVAGLNVEDNGYHDCHGAVSDKFEGAVNQASNIMGSETVATAGKSNHMEIDGSLEHKAVVNEESLPSTSVPALEEPLDFGAFNSAAELEVLGLERLKSELQSRGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAKNNNTITSSQRKLNTSIAAGAAAIAVERSGSRARQNLRSGTVQCCGCSGRYSGKSWRSGRYCPHEGENVLPSPTTFFGDLLRRRTVRLSHYPAIPVWGSVVPLRYLGLTTMHRIENVVKKKGSNGEGKP 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr20g00004 562 MobiDBLite consensus disorder prediction 198 276 - -
Mupr20g00004 562 PANTHER SPLICING FACTOR SF3A-RELATED 11 436 - -
Mupr20g00004 562 SUPERFAMILY Ubiquitin-like 6 89 IPR029071 -
Mupr20g00004 562 Pfam Replication stress response SDE2 C-terminal 367 434 IPR025086 -
Mupr20g00004 562 Coils Coil 381 401 - -
Mupr20g00004 562 Gene3D - 2 91 - -
Mupr20g00004 562 Pfam Silencing defective 2 N-terminal ubiquitin domain 10 157 IPR024974 -
Mupr20g00004 562 MobiDBLite consensus disorder prediction 205 236 - -
Mupr20g00004 562 ProSiteProfiles Ubiquitin domain profile. 10 75 IPR000626 GO:0005515
Mupr20g00004 562 MobiDBLite consensus disorder prediction 237 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr20g00004 Mupr-Chr20 27760 31567 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr20g00004 361 476 C2H2 Transcription Factor Family AT5G06160 34.483 5.87e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr20g00004 K25059 - gmx:100781694 616.69