LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr2087g00004	ATGGAGTCACCTGTTAATGGAGTTGAGTCCTTATCAGAGGTTCAGAATTCAGTTTCTGGGGCACATCATGATCCTCCTTCAACATATGGGGCTCCCCGTCCTTCACGGCCTCCCCTGAGATCATCTAGGAACCATGGACCTAGTCATCAATCCAAGACCATCCACCACCAAAACAGCCATGTAATTAATCAGAAGCATTCCTATCAGGAGGGAAACAATGTGGAGCATGAAGGGTTGCCAACAAAATTGTGCAGCAAGCAACAACCACTTGATGGTTCCAAGAATTGTGAGTCAAGTGGTGTGTTAGAATCTCAGTCTGACAATTGCATCTTAGGTCCGTCGAAACGAGCCATTGCTAATCATCATGCAAAGAGTTACTGTCCCTCAGAGGTTACTACTTTCTGTCCAAGTCCGCAGAATAGTTTCTATTCAGCCACTGTCTACTCAGAAGCCAAAGAAAGTTTCACCAACACTGAGGTCAGTGAGTGTGCTAGTGTTGACAAGTCTTGTGAGAGTGGAGAAGTGGCAAATTCCTGTGATTTTAATGAGAGCAGGAAGACTAGCATCTGTAGAGCAAGTACTGGCAGTGATGCTAGTGATGAAAGCAGCACCAGTAGTTTGAGCAGTGTTTTGTATAAACCTCACAAGGCAAATGACATAAGATGGGAAGCGATTCAAGCAATCCGTGCTCGAGATGGGATGTTGGAAATGAGGCACTTCAGGTTGTTGAAGAAATTGGGGTGTGGAGACATAGGGAGTGTGTATCTAGCAGAACTGAGTGGCACAAGAACTTCTTTTGCCATGAAGATCATGAACAAGACCGAGCTGGCAAACCGCAAGAAGCTTCTGAGGGCTCAGACAGAGAGAGAGATATTGCAGTCTCTAGATCATCCTTTTCTACCCACATTGTATACACACTTTGAGACAGAAACATTCTCCTGCTTGGTAATGGAGTTCTGCCCTGGTGGAGACCTGCATGCACTCAGGCAAAGACAACCAGGGAAGTATTTTTCGGAGCATGCTGTCAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAATCATCTACAGAGACCTCAAACCTGAGAATGTCTTGGTGAGAGAAGATGGTCACATAATGCTCTCAGATTTTGATCTCTCTCTAAGGTGCAGTGTGAGTCCAACTCTAGTAAAGTCATCAAACAACAACCTGGAGACAAAAAGCTCAGGATACTGCATCCAGCCCTCTTGCATTGAGCCAACATGTGTAATGCAACCAGACTGCATCCAGCCAGCATGCTTCACGCCACGCTTTCTATCTGGCAAATCCAAGAAAGACAAAAAGCATAAACCAAAGAATGACATGCATCACCAGGTGACCCCTCTTCCGGAGCTAATTGCAGAGCCAACAAATGCCAGATCAATGTCCTTTGTTGGAACACACGAGTACTTGGCACCGGAGATCATCAAGGGTGAAGGCCATGGAAGTGCTGTGGACTGGTGGACATTTGGGATATTCTTGTATGAGCTTTTGTTTGGAAGAACGCCATTCAAAGGTTCGGCGAATCGAGCAACGCTGTTCAATGTAATTGGACAGCCTTTGAGATTTCCAGAGTCTCCAACTGTCAGCTTTGCTGCCAGGGACTTGATAAGAGGCTTGCTTGTGAAAGAGCCTCAGCATCGTCTTGCCTATAGACGTGGTGCTACAGAGATAAAACAACATCCATTCTTTCAGAATGTTAACTGGGCACTGATCCGTTGTGCAAATCCTCCAGAGGTTCCAAGGCAGGTTATGAAGCTTCCTCAAACGGAAAAGGACCTTGGTGTCAAGCCTTCTGCTAATTATTTAGACATTGATTTCTTT	1863	0.4557	MESPVNGVESLSEVQNSVSGAHHDPPSTYGAPRPSRPPLRSSRNHGPSHQSKTIHHQNSHVINQKHSYQEGNNVEHEGLPTKLCSKQQPLDGSKNCESSGVLESQSDNCILGPSKRAIANHHAKSYCPSEVTTFCPSPQNSFYSATVYSEAKESFTNTEVSECASVDKSCESGEVANSCDFNESRKTSICRASTGSDASDESSTSSLSSVLYKPHKANDIRWEAIQAIRARDGMLEMRHFRLLKKLGCGDIGSVYLAELSGTRTSFAMKIMNKTELANRKKLLRAQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPGKYFSEHAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSVSPTLVKSSNNNLETKSSGYCIQPSCIEPTCVMQPDCIQPACFTPRFLSGKSKKDKKHKPKNDMHHQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVIGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCANPPEVPRQVMKLPQTEKDLGVKPSANYLDIDFF	621

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr2087g00004	621	MobiDBLite	consensus disorder prediction	41	59	-	-
	Mupr2087g00004	621	Pfam	Protein kinase domain	241	395	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr2087g00004	621	Pfam	Protein kinase domain	474	577	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr2087g00004	621	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	361	373	IPR008271	GO:0004672\|GO:0006468
	Mupr2087g00004	621	MobiDBLite	consensus disorder prediction	1	23	-	-
	Mupr2087g00004	621	Gene3D	Transferase(Phosphotransferase) domain 1	324	393	-	-
	Mupr2087g00004	621	FunFam	serine/threonine-protein kinase D6PK-like	472	595	-	-
	Mupr2087g00004	621	ProSiteProfiles	Protein kinase domain profile.	240	577	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr2087g00004	621	Gene3D	Phosphorylase Kinase; domain 1	238	323	-	-
	Mupr2087g00004	621	SUPERFAMILY	Protein kinase-like (PK-like)	215	600	IPR011009	-
	Mupr2087g00004	621	MobiDBLite	consensus disorder prediction	1	59	-	-
	Mupr2087g00004	621	CDD	STKc_phototropin_like	238	595	-	-
	Mupr2087g00004	621	FunFam	serine/threonine-protein kinase D6PK-like	324	391	-	-
	Mupr2087g00004	621	FunFam	Serine/threonine-protein kinase D6PK-like	238	323	-	-
	Mupr2087g00004	621	SMART	serkin_6	240	577	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr2087g00004	621	Gene3D	Transferase(Phosphotransferase) domain 1	471	595	-	-
	Mupr2087g00004	621	PANTHER	FLIPPASE KINASE 1-RELATED	72	599	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr2087g00004	Mupr-Chr2087	22908	26291	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr2087g00004	148	621	AGC Kinase Gene Family	AT5G47750	70.732	0.0	705

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Mupr2087g00004		Pkinase	6e-38	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr2087g00004	K08286		-	gmx:100810909	1109.75