Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2087g00002 ATGGAAGAAGAGGTTGTGGAAAACCTTTGGAACGGGGATAGAAAATCTCAAATTCAAGCAGCTATAAAACTTGGTAGATTAAGCAGTAAGCAGAGGCACAAGTTGGAAGGAAGTGGAGTTATGGTTCCTCTGGTTTCCATGCTTCATTCTGAAAACTATGAAGCCATAGAAGCTGCTCTGTGTGCTTTGCTCAGCCTTTCCTTTGGCAGTGAAAGAAACAAGATTCGGATCATCAAATCTGGAGCTTTGCCAGTTTTGCTGAGTCTCCTCCATAGTCATAGCCAGACAGTGACACAATTGACATTAGCAGCCATGTTAACCCTGTCTTCTTGCAAGGCAAATAAGGTAACAATTGCTTCATCTGGGGCTGTCCAACTCTTGGCTGAATTTGTCAACAGCAGTGGTAGCACTCAGTCCCAGTTTGATGCAATTGCTACTCTACACAACCTCACAACCTGCCAAGAGATTATTCCATTGATTGTCTCTTCTGGTGTTATGCTCTCCTTGCTTGAACTGATCCACACCTCAGTAAAATCATGTCCATTGGTTGAGAAAGCAATTGGGTTGCTAGAAAACATTGTGTCTTCATCAGAGAGTGCACTTTGTGAGGCTGCTAGTACTGGGGGAGCAATCAGGATGCTGGTTGAGACTATTGAAGATGGATCTTTACTAAGCAAAGAGCACGCAGTGTGTATACTTCTCCTTATATGCCAGAGCTGTAGAGAAAAATATAGAGGGTTGATTTTGACAGAGGGGGTGATGCCAGGATTGCTTCAGTTAAGCGTGGATGGAACATGGAGAGCCAAATCCATGGCTCGAGAACTGTTGTTGCTTCTGAGGGACTGCTCCAATTATAGCTCAAAATGTACACAAATTAATCATGAGCTTATAGAACAGATAATGGAAGAAATTGAAGCAGGAGAGAAATTGGCAGATACTACTTTAAGGTTGGTAGAGGAGATGATCGCAAAGCTCAATGCTTAA 984 0.4289 MEEEVVENLWNGDRKSQIQAAIKLGRLSSKQRHKLEGSGVMVPLVSMLHSENYEAIEAALCALLSLSFGSERNKIRIIKSGALPVLLSLLHSHSQTVTQLTLAAMLTLSSCKANKVTIASSGAVQLLAEFVNSSGSTQSQFDAIATLHNLTTCQEIIPLIVSSGVMLSLLELIHTSVKSCPLVEKAIGLLENIVSSSESALCEAASTGGAIRMLVETIEDGSLLSKEHAVCILLLICQSCREKYRGLILTEGVMPGLLQLSVDGTWRAKSMARELLLLLRDCSNYSSKCTQINHELIEQIMEEIEAGEKLADTTLRLVEEMIAKLNA 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2087g00002 327 SMART arm_5 70 110 IPR000225 GO:0005515
Mupr2087g00002 327 SMART arm_5 153 195 IPR000225 GO:0005515
Mupr2087g00002 327 SMART arm_5 111 152 IPR000225 GO:0005515
Mupr2087g00002 327 SMART arm_5 28 68 IPR000225 GO:0005515
Mupr2087g00002 327 FunFam U-box domain-containing protein 4 201 316 - -
Mupr2087g00002 327 Gene3D - 2 277 IPR011989 -
Mupr2087g00002 327 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 164 208 IPR000225 GO:0005515
Mupr2087g00002 327 FunFam U-box domain-containing protein 4 3 197 - -
Mupr2087g00002 327 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 39 81 IPR000225 GO:0005515
Mupr2087g00002 327 Pfam Armadillo/beta-catenin-like repeat 71 105 IPR000225 GO:0005515
Mupr2087g00002 327 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 81 123 IPR000225 GO:0005515
Mupr2087g00002 327 PANTHER U BOX DOMAIN-CONTAINING 3 282 - -
Mupr2087g00002 327 SUPERFAMILY ARM repeat 3 304 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2087g00002 Mupr-Chr2087 12648 14089 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2087g00002 4 281 U-box Gene Family AT3G54790 32.979 8.60e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2087g00002 - - gmx:100778534 531.561