Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2085g00007 ATGCTGAAATCAGGCATGGGAATTGAGGAGAGAAAGCAGGCTAAGAAATCAGCGCAGGCCAGCTCCAGAAAGGGGTGTATGAGAGGCAAAGGAGGCCCTGAGAACGCGAGTTGCACCTACAAAGGTGTGAGACAGAGAACCTGGGGAAAATGGGTTGCTGAAATACGCGAACCCAACCGTGGTGCTAGACTCTGGCTCGGGACATTTGAAACCTCTCATGAGGCTGCTTTAGCTTATGATACTGCAGCACGCAAGCTTTATGGCCCAGATGCCAAGCTCAATTTGCCTGAATTCTATATGAAATCTCAATCTCAACCTCAATCTCAGTGTCCACCACCACCTTCTGCTACCAACGCTCAAATTCCTCAAATGGAGAACCTACACCAGCCACAGATTCCACTCAACATAGACATGGCCACTTATTCTAATTTCAACAGTTTCAACACCAATCCTTCACTCACCATGGCCTCTCAGCAAGTTGGTGTTGCACCAATTTACACCAGTGACTCCATCGTGTCTCTTCCCCTGGACACGAATCCTAATCTTAAGCCAGTTGGAACCTATGCAAAACCTATGGAGAACGAGGGGGAGTTTCACCCTTCGATGGGGACAATGAACGAGGGTTTGCCAGTTTTTGATGATTCAATCTGGACTGAAGCTGCTATGTCCCTCGATTTTCCTCTAATTGCAGCAGAGACTGAGATTTACACGGCTGATGCG 720 0.4806 MLKSGMGIEERKQAKKSAQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFETSHEAALAYDTAARKLYGPDAKLNLPEFYMKSQSQPQSQCPPPPSATNAQIPQMENLHQPQIPLNIDMATYSNFNSFNTNPSLTMASQQVGVAPIYTSDSIVSLPLDTNPNLKPVGTYAKPMENEGEFHPSMGTMNEGLPVFDDSIWTEAAMSLDFPLIAAETEIYTADA 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2085g00007 240 SUPERFAMILY DNA-binding domain 39 96 IPR016177 GO:0003677
Mupr2085g00007 240 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Mupr2085g00007 240 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Mupr2085g00007 240 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Mupr2085g00007 240 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 13 155 - -
Mupr2085g00007 240 MobiDBLite consensus disorder prediction 1 17 - -
Mupr2085g00007 240 Gene3D AP2/ERF domain 39 97 IPR036955 GO:0003700|GO:0006355
Mupr2085g00007 240 MobiDBLite consensus disorder prediction 1 38 - -
Mupr2085g00007 240 CDD AP2 38 97 IPR001471 GO:0003700|GO:0006355
Mupr2085g00007 240 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
Mupr2085g00007 240 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Mupr2085g00007 240 FunFam Ethylene-responsive transcription factor 2 38 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2085g00007 Mupr-Chr2085 36491 37210 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2085g00007 13 112 AP2-EREBP Transcription Factor Family AT1G75490 77.670 3.88e-53 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr2085g00007 AP2 2.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2085g00007 - - gmx:100797850 352.829