Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2082g00004 ATGGCCACCGTGAATCCGCAGCCTCTGCACTTCGAGGACCCTGCGATACCCGTCGTCGACGACGACGATGACGATGACTTGGACGACGCTAATGTTAATTCACTGCACGTTGCTAATGCTTCCAGCAATCATGAACCGGTGCTTGCTATGCCTTCTAGAACTAGCGAGCTCACTCTTTCTTTTGAGGGTGAGGTTTATGTCTTTCCCGCTGTCACTCCTCAGAAGGTGCAAGCTGTCTTGCTGCTCTTGGGAGGACGTGATGTGCAGGCGGGCGAGCCTGCTGTTGAACTACCATTTGATCATAGTAACAGGGGCATGGGTGATGCTCCGAAGCGTTCAAACCTTTCACGAAGAATAGCATCCTTGGTCAGGTTCCGCGAGAAACGCAAGGAAAGATGTTTTGACAAGAAAATTAGGTATTCCGTGAGAAAAGAGGTGGCACAGAGGATGCATCGGAAGAATGGGCAGTTTGCATCCTTGAAGGAAAGCCCAGGTTCATCTAATTGGGATTCTGCACAGAGTGCTGGTCAAGATGGCACTCCTCATTCTGAATCTGTACGTAGATGTCACCATTGTGGTGTCAGTGAAAACAATACACCTGCAATGCGTCGTGGACCAGCTGGACCAAGGACTTTATGTAATGCATGTGGCCTTATGTGGGCTAACAAGGGCACACTCAGAGATCTCAGTAAGGGAGGAAGAAATCTTTCTGTCGAGCAAAGTGATCTGGACACTCCTATTGATGTCAAGCCTACTAGTGTTCTTGAAGTGGAATTGCCCGGCATCCATGATGAGCAAGGTAGTTCTGAAGACCTTTCCAAGTCCAACACTGCTGATGGTTCTAGTAATCATGCTCTAAACCGCAGTGATGAGGAATTGCCTGAAACTGCAGAACACTTTACGAATGCTCTGCCACTGGGAATTGGTCGTTCTTCAACAAATGACAATGAGCAGGAACCTCTGGTAGAGCTCTCTAATCCTTCAGATACAGATATTGACATTCCAGGAAACTTTGATTAG 1020 0.4794 MATVNPQPLHFEDPAIPVVDDDDDDDLDDANVNSLHVANASSNHEPVLAMPSRTSELTLSFEGEVYVFPAVTPQKVQAVLLLLGGRDVQAGEPAVELPFDHSNRGMGDAPKRSNLSRRIASLVRFREKRKERCFDKKIRYSVRKEVAQRMHRKNGQFASLKESPGSSNWDSAQSAGQDGTPHSESVRRCHHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSKGGRNLSVEQSDLDTPIDVKPTSVLEVELPGIHDEQGSSEDLSKSNTADGSSNHALNRSDEELPETAEHFTNALPLGIGRSSTNDNEQEPLVELSNPSDTDIDIPGNFD 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2082g00004 339 ProSitePatterns GATA-type zinc finger domain. 189 216 IPR000679 GO:0006355|GO:0043565
Mupr2082g00004 339 MobiDBLite consensus disorder prediction 260 339 - -
Mupr2082g00004 339 MobiDBLite consensus disorder prediction 159 181 - -
Mupr2082g00004 339 ProSiteProfiles GATA-type zinc finger domain profile. 183 242 IPR000679 GO:0006355|GO:0043565
Mupr2082g00004 339 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 183 233 - -
Mupr2082g00004 339 MobiDBLite consensus disorder prediction 151 186 - -
Mupr2082g00004 339 CDD ZnF_GATA 188 232 IPR000679 GO:0006355|GO:0043565
Mupr2082g00004 339 ProSiteProfiles Tify domain profile. 50 85 IPR010399 -
Mupr2082g00004 339 SMART GATA_3 183 236 IPR000679 GO:0006355|GO:0043565
Mupr2082g00004 339 Gene3D - 183 236 IPR013088 GO:0006355|GO:0008270
Mupr2082g00004 339 SMART tify_2 50 85 IPR010399 -
Mupr2082g00004 339 MobiDBLite consensus disorder prediction 306 325 - -
Mupr2082g00004 339 Pfam GATA zinc finger 189 225 IPR000679 GO:0006355|GO:0043565
Mupr2082g00004 339 Pfam tify domain 52 84 IPR010399 -
Mupr2082g00004 339 ProSiteProfiles CCT domain profile. 118 160 IPR010402 GO:0005515
Mupr2082g00004 339 PANTHER GATA TRANSCRIPTION FACTOR 28 21 332 IPR045280 GO:0006355
Mupr2082g00004 339 MobiDBLite consensus disorder prediction 1 25 - -
Mupr2082g00004 339 Pfam CCT motif 118 159 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2082g00004 Mupr-Chr2082 61299 65763 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2082g00004 5 231 Tify Gene Family AT1G51600 47.791 2.15e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr2082g00004 CCT 9.8e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2082g00004 - - gmx:100801328 604.749