Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2081g00008 ATGTTTTCCTTCACTCTCCCAACCGCGTTCCCCTCAAAACCCCACCTCTCTCCGGTTCGCTGCGGCGTCCGCGAACTCCGCGAGCGAATCCAAACCGTCGAAATCACCCAAAAGGTCACCGAAACGATGAAGCTCGTCGCCGCCGCTCGAGTCCGCCGCGCCCAGGAAGCCGTGGTCAACGGTCGCCCCTTTTCGTCAAACCTCGCCGCAATGCTAAACGACATCACGCAGCGCCTCCATAACGACGACGTTTCCACCCCTCTCACCCACGCCAGACCCGTCAAGAACGTTGCCCTCGTCGTCTTCACCGCCGATCGCGGCCTCTGCGGCAGTTTCAACAAACTGTTAATAAGAAAAGCCATCACCCGAATCGAGGAATTGAAGAAACTCGGTTTGGGGTGCGTTGTAATCAGCGTTGGCAAAAAGGGTAACTCGTTTTTCTCTCACCACAACGACGACGATGACGACGATGAGGACCCTTTTGTTAAAGTTGATAGCTTGATTGAAATTGGGGGTTTTCCCACCACCAAGGAGGCCCAGGTCATTGCCGATGATGTTTTTTCGCTGTTTGTGAGTGAGGAGGTTGACAAGGTTGAGCTTGTGTACACAAAGTTTGTGTCTTTGGTTAGGTTTGAGCCTGTGGTTCACACTTTGTTGCCTTTGGGAGTGGATGGGAATTGTGGGGTCATGGGGGATGAGGTTTTTAGGTTGAGTTCTAAGGGGGGGAAGTTGGCTGTGGAGAGGGAGAGTGTTTTGAGGGGGTTGCAGGAGTCTCTGGCTAGTGAACTTGCTGCTAGGATGGGGGCCATGGCTGCTGCCACTGATAATGCGGTTGAGTTGAGGAAGAGTCTTTCAGTTGCCTATAATCGTGAGCGCCAGGCCAAGATCACCGGGGAGTTGTTGGAGATTGATCAGAGCAGAACTTTGGCCCCTCAACTGTCTACGTTTGTTGCCATGCATTAA 963 0.5306 MFSFTLPTAFPSKPHLSPVRCGVRELRERIQTVEITQKVTETMKLVAAARVRRAQEAVVNGRPFSSNLAAMLNDITQRLHNDDVSTPLTHARPVKNVALVVFTADRGLCGSFNKLLIRKAITRIEELKKLGLGCVVISVGKKGNSFFSHHNDDDDDDEDPFVKVDSLIEIGGFPTTKEAQVIADDVFSLFVSEEVDKVELVYTKFVSLVRFEPVVHTLLPLGVDGNCGVMGDEVFRLSSKGGKLAVERESVLRGLQESLASELAARMGAMAAATDNAVELRKSLSVAYNRERQAKITGELLEIDQSRTLAPQLSTFVAMH 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2081g00008 320 Gene3D ATP synthase, gamma subunit, helix hairpin domain 238 308 - -
Mupr2081g00008 320 PRINTS ATP synthase gamma subunit signature 196 213 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mupr2081g00008 320 PRINTS ATP synthase gamma subunit signature 257 276 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mupr2081g00008 320 PRINTS ATP synthase gamma subunit signature 94 113 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mupr2081g00008 320 PRINTS ATP synthase gamma subunit signature 288 309 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mupr2081g00008 320 FunFam ATP synthase gamma chain 87 222 - -
Mupr2081g00008 320 PANTHER ATP SYNTHASE GAMMA CHAIN 8 303 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mupr2081g00008 320 FunFam ATP synthase gamma chain, chloroplastic 21 88 - -
Mupr2081g00008 320 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 23 303 IPR035968 GO:0015986|GO:0045261|GO:0046933
Mupr2081g00008 320 Gene3D - 89 222 - -
Mupr2081g00008 320 Hamap ATP synthase gamma chain [atpG]. 20 310 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mupr2081g00008 320 NCBIfam ATP synthase F1 subunit gamma 23 303 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mupr2081g00008 320 CDD F1-ATPase_gamma 24 303 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mupr2081g00008 320 Gene3D ATP synthase, gamma subunit, helix hairpin domain 22 88 - -
Mupr2081g00008 320 Pfam ATP synthase 23 303 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2081g00008 Mupr-Chr2081 42775 44708 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2081g00008 19 303 Primary Pumps ATPases AT1G15700 57.798 6.72e-120 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2081g00008 K02115 - gmx:100797879 395.971