Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2081g00006 ATGGAACACATAGTAGTAGGACTAGAGGAATTAACCACTGGCTCCGAGAGTTACTCGGAAGTTTATGCCCAAAGATTCTGTTGCCACCAACCTCCACCACCGTTCGCTGCCCTAGTTCCAACGTTCGCCGCCGCTACCACCACCATAACGAATTGGAACTTGATGGAGGGAATGGCAAGCATTAATGATGCAGCCAATGGTGAAAATGGGTTGCTAGCAATGTTTGGTGGCAATGAAAATGGTGTCGGTGTCAGCGGCGGCGGCGGAGGAAGTGGCAGCGGCGGTCAGGGTGGTGGAAACGTGGAGGAGTCATCGCTGAAGAAGGGTCCTTGGACAACAGCAGAGGATGCTGTTCTTATGGATTATGTGACAAAGCATGGTGAAGGGAATTGGAATGCAGTGCAAAGGAACACAGGGTTGAATAGATGTGGGAAGAGTTGTAGGCTTAGATGGGCCAACCACTTGAGGCCCAATTTGAAGAAAGGGGCCTTCTCCACAGAAGAAGAGAAGCTCATTGTTGATCTTCATGCCCAATTTGGCAACAAATGGGCCCGAATGGCTGCTCTGTTACCTGGGAGAACAGACAATGAAATTAAGAATTACTGGAACACAAGGATAAAACGGCGCCAAAGACAGGGTCTTCCTCTCTATTCCGATGAGAAAGATCAGCGTCGTCCAACAACACCACCCACTTCCACTCCCACCACCACCACCTCTTCACCATGCCTCACTCCAACATCCTCAAACCCCAACAACTTTGAGTTCTTCAATCAAAATCAAAACCAAAATCAACACCAACAACACCAACACACTTTCTTAGACCCTTCACCCCTACCATTCTCTTCTTCATCTTCCTTCACCTTCCAAAGACCTGCACCAATGTTATGCACACCTCTCCGCTTCAAGCGTTACCGCGCCTCTCCGTCCTACAACCTCCCCGAGGCTCCCTCCCAGTTCCCTCATCTGGACGGTTTCCGGTTTCCGGTTTCCGGTTTCTCTCAGTTCTTTCAGCCCTCTTTGTTGGACTCTTCTTCCTCTTCCACCTTCACGCCCAAGCTGGACTTCCCTTCCAATCAGTTCTATAGACCACCGCCCCAGGACCCTGAGATTAAGTTTGACTTTGACTTCAACGACCCTTCCTTTCAAAACAGTACTGGCTTGCTTGGAGATCTTCTCTTGGAGGCTCAGGCACTGGCTTCGGGCCAGAACTCCAAGAAACGAACCTACTTGAGCTTGAATGAGGGGAATGATATGTTTAATGCCTGCCAAAGCTTTGAGGACTTGCCACCTTCCTCTCTTTACTGCTCCTCTACTTCAGAACCCAAACCAAAGGAAGAAGTTCAGGACCTTAGCAAATTCATGAATGAGGACTATTCATCATTGCTTACCGTAATTCCATCTTCCAATATGCAGGGTCATGAGTGGCACAATAATAATAATAATAATAATAGTGCCCCAGAAGTGTCCAATGTCCAATCCTCTGGCAGTGGCATGACAGATGACAATTTTGGACTTGACATCAAGCCCATAGCTTCATTGTTTCCTCTCACCAACACAACAAACCATAATGATCAAAACCAGGGTTACTACTCTTGGGACAATTTACCTGGTCTCTGCTAA 1620 0.4796 MEHIVVGLEELTTGSESYSEVYAQRFCCHQPPPPFAALVPTFAAATTTITNWNLMEGMASINDAANGENGLLAMFGGNENGVGVSGGGGGSGSGGQGGGNVEESSLKKGPWTTAEDAVLMDYVTKHGEGNWNAVQRNTGLNRCGKSCRLRWANHLRPNLKKGAFSTEEEKLIVDLHAQFGNKWARMAALLPGRTDNEIKNYWNTRIKRRQRQGLPLYSDEKDQRRPTTPPTSTPTTTTSSPCLTPTSSNPNNFEFFNQNQNQNQHQQHQHTFLDPSPLPFSSSSSFTFQRPAPMLCTPLRFKRYRASPSYNLPEAPSQFPHLDGFRFPVSGFSQFFQPSLLDSSSSSTFTPKLDFPSNQFYRPPPQDPEIKFDFDFNDPSFQNSTGLLGDLLLEAQALASGQNSKKRTYLSLNEGNDMFNACQSFEDLPPSSLYCSSTSEPKPKEEVQDLSKFMNEDYSSLLTVIPSSNMQGHEWHNNNNNNNSAPEVSNVQSSGSGMTDDNFGLDIKPIASLFPLTNTTNHNDQNQGYYSWDNLPGLC 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2081g00006 539 MobiDBLite consensus disorder prediction 476 500 - -
Mupr2081g00006 539 SUPERFAMILY Homeodomain-like 105 202 IPR009057 -
Mupr2081g00006 539 MobiDBLite consensus disorder prediction 227 256 - -
Mupr2081g00006 539 CDD SANT 163 204 IPR001005 -
Mupr2081g00006 539 Pfam Myb-like DNA-binding domain 108 155 IPR001005 -
Mupr2081g00006 539 Pfam Myb-like DNA-binding domain 161 204 IPR001005 -
Mupr2081g00006 539 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 91 490 - -
Mupr2081g00006 539 CDD SANT 110 155 IPR001005 -
Mupr2081g00006 539 MobiDBLite consensus disorder prediction 476 502 - -
Mupr2081g00006 539 SMART sant 107 157 IPR001005 -
Mupr2081g00006 539 SMART sant 160 208 IPR001005 -
Mupr2081g00006 539 FunFam MYB-related transcription factor 107 160 - -
Mupr2081g00006 539 Gene3D - 107 160 - -
Mupr2081g00006 539 MobiDBLite consensus disorder prediction 84 108 - -
Mupr2081g00006 539 Gene3D - 163 209 - -
Mupr2081g00006 539 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 103 155 IPR017930 -
Mupr2081g00006 539 MobiDBLite consensus disorder prediction 212 226 - -
Mupr2081g00006 539 ProSiteProfiles Myb-like domain profile. 156 206 IPR001005 -
Mupr2081g00006 539 FunFam Transcription factor GAMYB 163 209 - -
Mupr2081g00006 539 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 156 210 IPR017930 -
Mupr2081g00006 539 ProSiteProfiles Myb-like domain profile. 103 155 IPR001005 -
Mupr2081g00006 539 MobiDBLite consensus disorder prediction 212 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2081g00006 Mupr-Chr2081 28160 31343 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2081g00006 88 539 MYB Transcription Factor Family AT4G26930 37.554 4.63e-71 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr2081g00006 Myb_DNA-binding 7.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2081g00006 - - gmx:102659401 588.956