Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2073g00002 ATGGCCTTCCCACCCCCTCACACTTTCATGTTCCAAACCCACGAAGATCATGACCACCACCAACTCCATCTTCGCTCAACCTCAACCTCCCTCAACGCCTTCCCCTCCTTCCCACCCCATCACTTTCAAGGTAATAATCTCTCTCTCTCTCTCACACACACATACACAACACACTCATCATCCCTCTCTATAAGTGCAATTCCAAGTCAATTCATATATTTTGTTCATGTATATCAAAGTGGTGGTGGTGGTGGTGGTGCAGGTGCAGGTTTTATGATGAAGCGGTCGATGTCGTTTTCAGGCATAGAGAACAAGTGCGATGAAGTGCATGGAGACGACGAGTTGTCGGATGATGGATCTCAGCTTGGGGAGAAGAAGAAGAGGCTGAGTTTGGAGCAAGTGAAGGCCCTTGAGAAGAGTTTTGAGTTGGGGAACAAGCTTGAGCCTGAGAGGAAAATGCAGCTTGCCAAGGCTTTGGGGCTTCAGCCAAGGCAGATCGCCATATGGTTCCAGAACAGGAGAGCAAGGTGGAAGACTAAGCACCTTGAAAAGGAGTATGAAGTTCTCAAGAAGCAGTTTGAAGCTGTCAAAGCTGATAATGACTCCCTCAAGGCTCAGAACCAGAAACTACATGCAGAGTTACAAACTCTAAAAACCAGTAGGGAATGCTGTGAAACCGGAACAGTTAACCTCAAAAAGGAAACTGAGGGTTCTTGGAGCAATGGAAGCAACAACAGTTCAGAAATCAATTTGGATCTCTCAAGAACACCAGTGATGAACAGTCCTGTGTCTTCTCAGAATGGTAAAAACCTTCTTCCCACTTCCCATAAGCCCTCAAGCATCACTCAACTCCTCCAATGCTCATCAAGATCAGATCTCCAAGATGAGAGCTTCTGCAACATGTTCCACAACATTGATGAGCAGCAGAATTTTTGGCCCTGGCCTGATCAGCAGCACCAGTTTCATTAA 969 0.4644 MAFPPPHTFMFQTHEDHDHHQLHLRSTSTSLNAFPSFPPHHFQGNNLSLSLTHTYTTHSSSLSISAIPSQFIYFVHVYQSGGGGGGAGAGFMMKRSMSFSGIENKCDEVHGDDELSDDGSQLGEKKKRLSLEQVKALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKHLEKEYEVLKKQFEAVKADNDSLKAQNQKLHAELQTLKTSRECCETGTVNLKKETEGSWSNGSNNSSEINLDLSRTPVMNSPVSSQNGKNLLPTSHKPSSITQLLQCSSRSDLQDESFCNMFHNIDEQQNFWPWPDQQHQFH 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2073g00002 322 Gene3D - 117 195 - -
Mupr2073g00002 322 SUPERFAMILY Homeodomain-like 116 181 IPR009057 -
Mupr2073g00002 322 PRINTS Lambda-repressor HTH signature 151 160 IPR000047 GO:0003677
Mupr2073g00002 322 PRINTS Lambda-repressor HTH signature 160 176 IPR000047 GO:0003677
Mupr2073g00002 322 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 95 314 IPR045224 GO:0003700
Mupr2073g00002 322 Pfam Homeodomain 125 178 IPR001356 GO:0003677
Mupr2073g00002 322 ProSiteProfiles 'Homeobox' domain profile. 120 180 IPR001356 GO:0003677
Mupr2073g00002 322 Pfam Homeobox associated leucine zipper 180 219 IPR003106 GO:0006355|GO:0043565
Mupr2073g00002 322 FunFam Homeobox-leucine zipper protein ATHB-13 117 184 - -
Mupr2073g00002 322 Coils Coil 172 220 - -
Mupr2073g00002 322 SMART HOX_1 123 184 IPR001356 GO:0003677
Mupr2073g00002 322 CDD homeodomain 125 181 IPR001356 GO:0003677
Mupr2073g00002 322 ProSitePatterns 'Homeobox' domain signature. 155 178 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2073g00002 Mupr-Chr2073 19149 21577 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2073g00002 1 316 Homeobox Transcription Factor Family AT3G01220 45.511 8.69e-75 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr2073g00002 Homeodomain 1.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2073g00002 K09338 - gmx:100790803 479.559