Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2072g00001 ATGGAAACAAGAGAGTTTGTTGTTGCACCAAAAAAACCAACCCTTACACCTAAGGCTATAATACACCAAAATTTTGGCAATAAGGCTTGCTATGTAGTGGAAGAAGTGAAGGAGGATCATCAAACTGAATGTCCAGGATTGAATATTCCACAGATGGGTCCCTGCCTTTATCGTTGCACATTGCAGCTTCCAGAACTTTCTGTCATTTCGGGGACCTTTAAGAAAAAGAAGGATGCAGAGCAATCTGCAGCAGAGATTGCTATAGAGAAGCTTGGCATCTGTCTAGAGACCATTGATCCCACTCCACAAGAAGCACAGGAAACTTTAGTTGCTAGAATCTCCTACATATTTTCCGAAAAGTTTCTTATATGTGATCATCCACTCAGTGGTCACATTCGAGCAACTTTGTGGAGAAAAGGTGATCTTTGTGGATCGCTTCCTATTTCTGTCATTGCTGTCTACGATGCAAAACTTTTTAGCTTGTGTAAATGTATTAATCCTAAGGTGGAATCAAACCCATTTTTGGTTATTTCATACATAATGAGGGCCACTGCAAACTTATATCAGTTTCTTGCCACTTCTGAACGGAATCTCTGGATTAGAAGGCAGAGTCCATATCCACAAGATGTTATAGAGTCATTGATGATAGAAGATGGTTCACAAGAAGGCATTCGGGTTGCTGCCATACGCATTCCTAGTTCAGTGGAACAATCTATTGAAGCAGTGACACTTCATATTTCTTTTAAAGAATACTACCTTGATATCATTGCAAATGAACTTGGTTTTGAAGATGCTGCCAATGTTCTGATTTCAAGGAATTTGGGTAAAGCTTCTTCTGAGACAAGACTTTTCTTTACTGCTCCAAAATCGTATCTACTGGATCTATCTACTAAATTTCCAAATGGAAAAGAAACCCTTTATTTAAAGGGATCTCTGAATGTTAGGGCAAGTTACTTCGCTGGGCAAGATATAATTGGTGATGCAATATTAGCATCCATTGGATACACCCGGAAATCTAGAGATCTTTTCTACGAGGATGTTACGGTTCAGTTATATTACAGGATGCTTCTAGGGAAGACCCCAGGTGGCATTTATAAATTGTCCAGAGAGGCGATACTCGCATCTGAATTGCCATCAAGATTCACGGCAAGAGTAAACTGGAGGGGTTCCCTTCCCAGGGATATACTTTGTATGTTTTGCCGCCAGCACCGTCTGTCTGAACCTCTCTTTTCCATTACATTACATCCTTTCAAAACATCATCTGGATCATGTTTGAAGGTTGCAGAATCTGGTGAGAATGTGTTTGAATGTGTCAATGGGGTCTCTATAACAAGTCCAAAGCATTCAGATTCAGAATTGTTTATATGTGAAATAAAATTACTTTCTAGATGTGGAGATTTAATACTTTTGTGTTCCCCAAAGGATTATTATAAGAAGCAGAATGATGCTATTCAGAATGCTTCATTGAAACTCCTATCATGGCTGAACAAATGTTTTAAGAGTATGATTGTTGCTTTTGAGCAGCTTAATGAGACTGCAGATGACTTTAATATCCAGATTTATTCCGAAAAAATTTTCAGAGAGATTTTAGCTGGTCAATCAACTCACAATGGTCAGCTTAATGCAATTCAATGCAATAAATTAGTTGAATCAGTCTATATGAATTCATCACATGACATGCTGGGAAATATAGTGCACTCGTTGAAGATTGAAGGTCCATATTCTGGTATCTGTCCATGCAATGGATCTTTACCTTGTATAAGGTATTCAGTTTCTTTGGCTATGGAGGGTGAGAATGTCAAAGAAGTTATTGAAGTTTGTAACGAGTTTGAGTTTGAAGTGGGAGTTGGTGCTGTGGTTTCCTACATTGAGGAAGTTGTGATGCAGATGTCTGTTGGGCAGTCTGCATATTTCTCTACAAACTTACTCACTTCCGATTTGATTTTTGCTTCAGCTGGTGATTCAGTCAAAATGTTGTCCTTGTTATCTTCTAGTGAGTTACTCTCTCTCAACCTCCCCCATAGTTCTGTGGGGGAAGGCTGTTGTTTGGAATATGAAATAAGTTTGATCAAGGTTGCTGAACCTCCTGAGGAAAGAATGGAGCAGGCTCTTTTCAGCCCTCCACTTTCAAAACAACGGGTGGAATTTGCAGTGCAACAAATTCTTGAATCCCATGCTACTACGCTGATTGATTTTGGATGTGGATCTGGAAGCTTGTTGGAAGCATTGTTAAATTATCCAACATCTTTGGAGAAAATGGCTGGTGTTGATATTTCACAGAAGGGTCTTAGTCGTGCTGCAAAGGTACTTAATTCAAAATTAGTCACAAATTCAGATGCTGATGCGCAATGGACAAGCATAAAATCAGTAATACTTTATGAAGGTTCAATTACGAAATTTGGCCTTCAGTTGCATGGATTTGATATTGGTACATGTTTAGAGGTGATTGAACATATGGATGAAGATCAAGCTTGTCTATTTGGGGATGTGGCATTAAGTTCTTTTAGCCCAAGGATTCTCATTGTTTCCACACCAAATTTTGAATACAATGTAGTCCTTCAGAAGTCAAGTCCTCCAAACCAAGAACAGGAGGAATCAGACGAGAAAAGCCCCTTACAATCATGTAAGTTTCGTAATCATGATCACAAATTTGAGTGGACCAGAGAGCAGTTCAGACAATGGGCATCTGACTTAGCTGCTCGGCACAATTACAATGTGGTGTTTAGCGGGGTTGGTGGTTCTGCTGATGTTGAACCTGGCTATGCTTCACAGATTGCTGTGTTTAAAAGAGATTGGAAACTTGAAGATGATGTACTGAAGCATGCCGATGAACACCATTATAATGTCCATATTCTGGTGTCTGTCCTTGCAATGGATCTTTACCTTACTTCTGTGGCTTTGGAGGGTAAGAATGTGAAAGAAGTTATTGAAGTTTGTAATGAGTTTGAGTTTGAATTGAGAGTTGGCGTTGTTGTTTCATATATTGAGGAGGTTCCGATGCAGATGTCTATTTGCCAGGAGTCCGAAGTCTGCTGTATGGAATATGCAATAAGTTTGATCAAGGTTGCTGAACCTCCTGAGGAAAGAATGAAGCAGACTCGTTTCAACCCTCCACTTCCAAAGCACAATTCTTTAGTAACTGTGTCTACGAACAGGGAAGTGAATAGCCATATACCCAACTATCCAAACTTACCACTTCAGCTTATTTGTCAACTTCATAATGAGACTATGCATGTAACTATGTCTACAAACAGGGAACCATATACCCAACTATCTAAGCTTACCACTTCAGCTTATTTGTCAACTTCATATCGAGACTATGCATATTCAGATTGCCAATACTGGATGCTTCTAGGGAAGGCCCCAGTTATACTTGCTTCTGAGTTGCCATCAAGAATGACCAAAAGTGCAAAATGGAGGGTTTTCCTTCCCAAGGTTTCAGAATCTTGTGAGAATGTGTTTGATTGTGTCAACGGGGGGTTCTCTGGAACAGAAGACTGCTGTATGGAATATGCAATAAGTTTGATCAAGGTTGCTGAACCTCCTGAGGAAAGAATGAATTTAACAGCCAGTGAC 3576 0.3957 METREFVVAPKKPTLTPKAIIHQNFGNKACYVVEEVKEDHQTECPGLNIPQMGPCLYRCTLQLPELSVISGTFKKKKDAEQSAAEIAIEKLGICLETIDPTPQEAQETLVARISYIFSEKFLICDHPLSGHIRATLWRKGDLCGSLPISVIAVYDAKLFSLCKCINPKVESNPFLVISYIMRATANLYQFLATSERNLWIRRQSPYPQDVIESLMIEDGSQEGIRVAAIRIPSSVEQSIEAVTLHISFKEYYLDIIANELGFEDAANVLISRNLGKASSETRLFFTAPKSYLLDLSTKFPNGKETLYLKGSLNVRASYFAGQDIIGDAILASIGYTRKSRDLFYEDVTVQLYYRMLLGKTPGGIYKLSREAILASELPSRFTARVNWRGSLPRDILCMFCRQHRLSEPLFSITLHPFKTSSGSCLKVAESGENVFECVNGVSITSPKHSDSELFICEIKLLSRCGDLILLCSPKDYYKKQNDAIQNASLKLLSWLNKCFKSMIVAFEQLNETADDFNIQIYSEKIFREILAGQSTHNGQLNAIQCNKLVESVYMNSSHDMLGNIVHSLKIEGPYSGICPCNGSLPCIRYSVSLAMEGENVKEVIEVCNEFEFEVGVGAVVSYIEEVVMQMSVGQSAYFSTNLLTSDLIFASAGDSVKMLSLLSSSELLSLNLPHSSVGEGCCLEYEISLIKVAEPPEERMEQALFSPPLSKQRVEFAVQQILESHATTLIDFGCGSGSLLEALLNYPTSLEKMAGVDISQKGLSRAAKVLNSKLVTNSDADAQWTSIKSVILYEGSITKFGLQLHGFDIGTCLEVIEHMDEDQACLFGDVALSSFSPRILIVSTPNFEYNVVLQKSSPPNQEQEESDEKSPLQSCKFRNHDHKFEWTREQFRQWASDLAARHNYNVVFSGVGGSADVEPGYASQIAVFKRDWKLEDDVLKHADEHHYNVHILVSVLAMDLYLTSVALEGKNVKEVIEVCNEFEFELRVGVVVSYIEEVPMQMSICQESEVCCMEYAISLIKVAEPPEERMKQTRFNPPLPKHNSLVTVSTNREVNSHIPNYPNLPLQLICQLHNETMHVTMSTNREPYTQLSKLTTSAYLSTSYRDYAYSDCQYWMLLGKAPVILASELPSRMTKSAKWRVFLPKVSESCENVFDCVNGGFSGTEDCCMEYAISLIKVAEPPEERMNLTASD 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2072g00001 1192 Gene3D Vaccinia Virus protein VP39 705 959 IPR029063 -
Mupr2072g00001 1192 CDD DSRM_SF 20 88 - -
Mupr2072g00001 1192 ProSiteProfiles La-type HTH domain profile. 99 210 IPR006630 -
Mupr2072g00001 1192 Gene3D - 1 88 - -
Mupr2072g00001 1192 SUPERFAMILY dsRNA-binding domain-like 55 94 - -
Mupr2072g00001 1192 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 705 897 IPR029063 -
Mupr2072g00001 1192 PANTHER HEN1 674 949 IPR026610 GO:0001510|GO:0008171|GO:0008173
Mupr2072g00001 1192 Pfam Hen1 La-motif C-terminal domain 224 359 IPR040813 -
Mupr2072g00001 1192 FunFam Small RNA 2 6 88 - -
Mupr2072g00001 1192 FunFam Hua enhancer1 705 953 - -
Mupr2072g00001 1192 Pfam Methyltransferase domain 725 846 IPR025714 -
Mupr2072g00001 1192 Pfam Double-stranded RNA binding domain 2 361 499 IPR040870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2072g00001 Mupr-Chr2072 6273 30525 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2072g00001 1042 1092 B3 DNA Binding Superfamily AT1G30330 56.863 9.49e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2072g00001 K20798 - gmx:100785461 1646.33