Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2062g00011 ATGGTGTCACGGATGATCCATGTTTGGGATTTCGACAAGTTTTATGTTGGTTGCCAAGAGCCTAACACAACCTTCCTCCTTTACCTAGGAAGCTGCAGAACTCCTTTCCACCCTTTATGTGCAAGGGAAGCTAGACATAGAATGGAGGTTTGGGCAAAGTATGGTAATGATAATGTTGAGTTGCGGGCTTTTTGCTTGAAACACTCAGATCTGTCAGAGAACAGAAGCATCTTGCCATTGGAAGACTCTATTGCGGTTAAAAATGAATTTTCAGAAGCCAATGGCCTTCCAGTGACATTGGGAGTGAGTGATGAACACAACTTGAAAGATTGCAGGAATGGAGGATTAGCCTCTGATAGTAGTCCAGACAAATTGAACCATTATGATGAACCACCAGATGGAGGATTATCAGATTGCAGGTTAAGTGCTCACGACATGTTGGGATGTGGTGCTGTGCCCCAACAAAATGTTGGAGTGGTAGGGAGAGCCAATGAAAATGTTGATGCATCCGACTCTCTTGGTTTTGCACTTGTTTTGAAGAAGTTGATAGATCGAGGAAAAGTTGATGTAAAAGATGTAGCATTGGAGATTGGCATTTCACCAGATACATTAACTGCAAATACCAATGAAGCTTATAAGGCCCCTGATGTGCGTCACAAAATAGTCAATTGGCTAAAAGCCCATGTATACACTAGTGCATTTCAGAAGGGTTTAAAAGTTAAATTCAAACCAGCCAATGCATCCAAAAATGACAGTGGAGCCACAGATGGTTCTGATACTTTACCAATATCAGATTCGGGTTTGCTGGATCCTGTTGCTGTTAAGTCAGTTCCACCAAGGAGAAGAACCATCAGTAACATTAGGATTTTGAAGGATAATAAAGTGATATGTTCATCTGATGGGGTTACTAGTGAGAATGGGATGCCGGTGGACATGTGTAGAGTAGGTCAGTCCGACTGTGACAATCCAGCAAGTTTCAATGAAGCATCCATTCACAATGCAACTGAAATGCTTATTGATGAAAGAAATGGAATGAACTTAACCAAGTCTGAGGATATTTTTCATGAAGTTCAAGGCAATGCTGATAAACCTTACAAATCCTGCTTTTCTGGATGCATTTCAGAAGACAAGTCTACTGGTTGTATGCAAAATGCTTCTATGTTTTCTGATCAGCACTGTCTTGTTCATTCTGCTTCAGAACCACCTGATTCTGGTTTCATAAAGAAGGATGCAATCTCTAGTAGTTACATTCATCCTTACATCAGCAAGAAATTGCTGCAGATTCGTTCAAGTGATGAGGGAAATTCTTCTTTGGTTGAATCCTTCGGGGCTAGTGGCTGCTCAAGTAGCCAAAATCAGAACTTAACTTGCATTGACATTTCAAAGCCCGATGAAATAAATATGGAGAAGTTGGTTAGGGCTAGAAAAATGGGACTTTTGCAATTTTCTCCACAAGATGAATTGGAGGGGGAACTTGTTTATTTTCAGTATAGATTATTGCAGAATGCAGTTGCAAAGAAGAGGCATACTGATAACTTAATCTACAGTGTTGCCAAGAGTTTGCCACACGAGATTGATAAGGCACATCAACAAAGATGGGATGATGTTATTGTTAATCAATATCTACGTGATCTTAGAGAGGCAAAAAAGCAGGGCAGAAAAGAAAGAAAGCACAAGGAAGCACAGGCAGTATTGGCTGCTGCAACTGCTGCTGCGGCAGCATCTACTAGGTCTTTCCGGAAAGACACCTTAGATGAATCTATGCAACAGGAGAATTTGTTAAAATTGGAGACACTAAATGGAAGGACCGGTGCTTGTTCTCAGCCAATGCCCCGAGCCAAAGAGACACTTTCAAGGGTAGCTGTGACAAGAACTTCATCAGAAAAATATTCGGATTTTTGCATGCCAACCTCGGATTTTTCTAAGGAGCAATGTAAATCATGTGATATTTGCAGACGATCAGAGACTATGTTAAACCCTATCTTAGTCTGCTCTGGTTGCAAGGTTTCAGTGCACTTGGATTGCTATCGTAGTGTGAAAGAAACAACAGGTCCGTGGTACTGTGAGTTATGTGAAGATTTGTCATCTAGAAGCTCTGCGGCATCTGCTATCAATTTCTGGGAGAAGCCTTATATTGTTGCAGAATGTGCTCTCTGTGGTGGTACTACTGGTGCTTTTAGGAAGTCTTCTGATGGTCAATGGGTTCATGCCTTCTGTGCCGAGTGGGTTTTTGAGTCTACGTTCAAAAGAGGACAAATAGATGCTGTCGAAGGAATGGAAACTGTGCCAAAAGGAGTTGACATTTGTTGTATCTGCCACCGCAAGCATGGTGTATGCATGAAGTGTTGCTATGGCCATTGTCAGACCACATTCCATCCATCCTGTGCAAGAAGTGCTGGTTTGTACATGAATGTGAGGACTGCTGGTGGCAAGGTTCAACACAAAGCTTACTGTGAAAAACATAGTTTGGAGCAGAAGGCAAAGGCTGAAACTCAAAAACATGGAATTGAAGAGTTAAAAAGTATCAGGCAAATTAGGGTTGAACTAGAGAGATTACGTCTCCTTTGTGAAAGAATTGTCAAACGTGAAAAAATAAAGCGGGAATTGGTACTATGTTCACATGACATTCTTGCCTTCAAAAGAGATCATGTTGCTAGGTCTGTGCTGGTTCATAGCCCTTTCATCCTTCCAGATGGTAGTTCAGAATCAGCTACAACGTCTCTTAAAGGGAACACAGAGGGATACAGATCATGCAGTGAACCACTCCAAAGGTCAGATGATGTTACCGTGGACAGTTCTGTTTCTGCTAAGCACCGTGTCAGAGTTGCCATATCTATGGACACAGACCCAAAATTGGATGATGACTGCTCAACCTCTCAAAGTCACTATAACCACAAGATTCCAGAAAGAACGCAATTTTCTGGCAAGCAGATTCCTCATAGAGCTGCTGCATCACGTAATATCTCGGATGAGGGTGGATGGAGATCCAAATCTAGAAAGCATGCTGAGACATTTGGAAAAGAGCTTGTTATGACGTCAGATGAAGCATCTATGAAGAATTCAATGCTACCTAAAGGATATGCATATGTTCCTGCTGATTGCCTGTCAAATGACAAGCACTCTAACGAGGATGTATATGCTAGTGAACCAGTGGAGCATGACAGATAG 3168 0.4176 MVSRMIHVWDFDKFYVGCQEPNTTFLLYLGSCRTPFHPLCAREARHRMEVWAKYGNDNVELRAFCLKHSDLSENRSILPLEDSIAVKNEFSEANGLPVTLGVSDEHNLKDCRNGGLASDSSPDKLNHYDEPPDGGLSDCRLSAHDMLGCGAVPQQNVGVVGRANENVDASDSLGFALVLKKLIDRGKVDVKDVALEIGISPDTLTANTNEAYKAPDVRHKIVNWLKAHVYTSAFQKGLKVKFKPANASKNDSGATDGSDTLPISDSGLLDPVAVKSVPPRRRTISNIRILKDNKVICSSDGVTSENGMPVDMCRVGQSDCDNPASFNEASIHNATEMLIDERNGMNLTKSEDIFHEVQGNADKPYKSCFSGCISEDKSTGCMQNASMFSDQHCLVHSASEPPDSGFIKKDAISSSYIHPYISKKLLQIRSSDEGNSSLVESFGASGCSSSQNQNLTCIDISKPDEINMEKLVRARKMGLLQFSPQDELEGELVYFQYRLLQNAVAKKRHTDNLIYSVAKSLPHEIDKAHQQRWDDVIVNQYLRDLREAKKQGRKERKHKEAQAVLAAATAAAAASTRSFRKDTLDESMQQENLLKLETLNGRTGACSQPMPRAKETLSRVAVTRTSSEKYSDFCMPTSDFSKEQCKSCDICRRSETMLNPILVCSGCKVSVHLDCYRSVKETTGPWYCELCEDLSSRSSAASAINFWEKPYIVAECALCGGTTGAFRKSSDGQWVHAFCAEWVFESTFKRGQIDAVEGMETVPKGVDICCICHRKHGVCMKCCYGHCQTTFHPSCARSAGLYMNVRTAGGKVQHKAYCEKHSLEQKAKAETQKHGIEELKSIRQIRVELERLRLLCERIVKREKIKRELVLCSHDILAFKRDHVARSVLVHSPFILPDGSSESATTSLKGNTEGYRSCSEPLQRSDDVTVDSSVSAKHRVRVAISMDTDPKLDDDCSTSQSHYNHKIPERTQFSGKQIPHRAAASRNISDEGGWRSKSRKHAETFGKELVMTSDEASMKNSMLPKGYAYVPADCLSNDKHSNEDVYASEPVEHDR 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2062g00011 1055 ProSiteProfiles Zinc finger PHD-type profile. 645 694 IPR019787 -
Mupr2062g00011 1055 CDD ePHD 716 821 - -
Mupr2062g00011 1055 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 636 697 IPR013083 -
Mupr2062g00011 1055 PANTHER PHD FINGER PROTEINS 30 578 - -
Mupr2062g00011 1055 SMART PHD_3 768 822 IPR001965 -
Mupr2062g00011 1055 SMART PHD_3 647 692 IPR001965 -
Mupr2062g00011 1055 MobiDBLite consensus disorder prediction 113 132 - -
Mupr2062g00011 1055 Pfam PHD-zinc-finger like domain 715 821 - -
Mupr2062g00011 1055 Pfam PHD-finger 659 692 - -
Mupr2062g00011 1055 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 713 823 IPR013083 -
Mupr2062g00011 1055 Coils Coil 542 562 - -
Mupr2062g00011 1055 ProSiteProfiles Extended PHD (ePHD) domain profile. 713 822 IPR034732 -
Mupr2062g00011 1055 MobiDBLite consensus disorder prediction 900 926 - -
Mupr2062g00011 1055 SUPERFAMILY FYVE/PHD zinc finger 639 692 IPR011011 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2062g00011 648 836 C2H2 Transcription Factor Family AT3G14740 27.805 3.37e-15 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mupr2062g00011 zf-HC5HC2H_2 1.9e-22 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2062g00011 - - gmx:100775631 1787.31