Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2062g00007 ATGCCTCGCCAAGGTCCGGCGTCGCCGTCGCCGTCGCCGTCGCAGCCCTGCCCTCTCGACCCGAAAATCTGGCGGGCCTGCGCCGGAGGCTTGGTGGAAATACCGACGGTGAATTCTAGGGTTTACTACTTCGCCCAGGGGCACTTCGATCAAGCCTCGTCCCCTCCGCGAAACATTCCCCCTGTCGTTTTCTCGAAATCCTTCACTCTCTGCCGCGTCGACTCGGTTCAATTCCTCGCAGATCATCTCACCGACGAGGTTTTCGCGAAGCTGACTCTGCAACCTATTAATGATTACTTCACCGCGGAACCCTCTGTTGTTCCTCCCGCGCAGAAAGACGACGGCATGGTCATTTCGTTCGCCAAGATTCTCACGCCGTCTGACGCCAACAACGGCGGCGGGTTTTCCGTTCCAAGGTTCTGCGCGGACTCTATCTTCCCACCGCTTAACTTCGTGGCTGACCCGCCGGTGCAGAACCTCTTCGTCGCTGACTTGCACGGTTTCGTCTGGGAGTTCCGCCACATTTACCGTGGGACGCCGCGCCGGCACTTGCTCACCACCGGCTGGAGCAAGTACGTCAACAAGAAGAATCTCATCGCCGGAGACTCCGTCATCTTCATGAAGAACTCCAGCGGGAATTTGTTCGTCGGGATTCGCCGTTCCACGCGCTTAGCCTTCGACGTCGGTAACTGCCCCCTGAGCGGGAAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAAGCAGAAGAGAAGAAGGTTTTCTCGAGAAACGGGAAAGGCAGGCTGTCGGCGAAGGACGTTGTGAAGGCGGCGGAATTGGCCGCGCAGAACAAGCCGTTTGAGGTTGTTTATTATCCCAAGGCTGGTTGGTCGGAGTTTGTGGTGAAAGCTGAGACAGTGGATGAAGCAATGAGAATTGCTTGGTTCCCCGGAATGAGAGTGAAAATGGCTATGGAGACCGATGATTCGTCCAGGATGACATGGTTTCAGGGTACTTTGACTTCTGTCTCTTTTAGTAATAATGGCCAATGGCGATATTGTCCTTGGCGGATGCTTCAGATTACATGGGATGAACCTGAAGTGTTGCAGAATGCAAAGTGGGTCAGCCCTTGGCAGGTGGAACTTGTTTCCACCCATCCTGCACTTCATCCAGCATTCCCCTCAGCAAAAAGGTTTAGAGCTGCTCATGGTTCTGAGGTGATTACTACTGATGGAGAGGGGAACCCCTTTTCTATATTCCGTAATTCAGCAATGGGACACCTGAATCATACATTGTTCAGTGTTGGTACTTTACCTGCTGGCATGCAGGGAGCCAGGCATGATGTAATTTCTGCATCAACTATTTCCAACTATCCAAGTGAAATGTCTCACCTGTGTACAGGAAATTCCTTTGGGAACAGCAGGGTTCCAAGGCTGAAAACTTCATCAAGAGAGATAAATGTTGGCAGCTCTCAATCTGAGGAATTGTCATCTGATAGCCGTAGTAGTCTCCATTCCTGTGGCACAGAAATTGTTGGGAATAACGACTGCAACTCAAATTCTGTTAGACTTGTGCTATTTGGTAATGTCATTCCTGTATCTGTTGAAAATGGTTTGGACGGTACTGGTTGCACAGGAGACAATGGTTGCACTTACACACAACTGCTTGACAAGCTTGATGAGCAATGGAGGCTAGGGTGGGGAAGTGGGACATGTGATTTAGATCGGACA 1713 0.519 MPRQGPASPSPSPSQPCPLDPKIWRACAGGLVEIPTVNSRVYYFAQGHFDQASSPPRNIPPVVFSKSFTLCRVDSVQFLADHLTDEVFAKLTLQPINDYFTAEPSVVPPAQKDDGMVISFAKILTPSDANNGGGFSVPRFCADSIFPPLNFVADPPVQNLFVADLHGFVWEFRHIYRGTPRRHLLTTGWSKYVNKKNLIAGDSVIFMKNSSGNLFVGIRRSTRLAFDVGNCPLSGKEEEEEEEKEEEEAEEKKVFSRNGKGRLSAKDVVKAAELAAQNKPFEVVYYPKAGWSEFVVKAETVDEAMRIAWFPGMRVKMAMETDDSSRMTWFQGTLTSVSFSNNGQWRYCPWRMLQITWDEPEVLQNAKWVSPWQVELVSTHPALHPAFPSAKRFRAAHGSEVITTDGEGNPFSIFRNSAMGHLNHTLFSVGTLPAGMQGARHDVISASTISNYPSEMSHLCTGNSFGNSRVPRLKTSSREINVGSSQSEELSSDSRSSLHSCGTEIVGNNDCNSNSVRLVLFGNVIPVSVENGLDGTGCTGDNGCTYTQLLDKLDEQWRLGWGSGTCDLDRT 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2062g00007 571 ProSiteProfiles B3 DNA-binding domain profile. 120 222 IPR003340 GO:0003677
Mupr2062g00007 571 SMART B3_2 120 222 IPR003340 GO:0003677
Mupr2062g00007 571 CDD B3_DNA 119 220 IPR003340 GO:0003677
Mupr2062g00007 571 FunFam Auxin response factor 118 222 - -
Mupr2062g00007 571 Pfam B3 DNA binding domain 120 221 IPR003340 GO:0003677
Mupr2062g00007 571 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 19 492 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mupr2062g00007 571 SUPERFAMILY DNA-binding pseudobarrel domain 112 224 IPR015300 -
Mupr2062g00007 571 Gene3D - 310 381 - -
Mupr2062g00007 571 Coils Coil 233 257 - -
Mupr2062g00007 571 MobiDBLite consensus disorder prediction 234 256 - -
Mupr2062g00007 571 Gene3D - 117 222 IPR015300 -
Mupr2062g00007 571 Pfam Auxin response factor 271 354 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2062g00007 Mupr-Chr2062 39657 44163 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2062g00007 19 542 B3 DNA Binding Superfamily AT1G77850 48.457 2.16e-155 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mupr2062g00007 B3 5e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2062g00007 - - aprc:113852457 700.664