Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2059g00001 ATGGATAGTGTTGTGTTGTTGGCCGTCTCTCTTTCTCTCCCAATCTGCGAAAGCCGAGGGAGACCAAACCAAAAAAAAAAAAACATCATAAGCCAAAACAACACAACACAACACAACACCCCATTCGTTCAACCCCCAATTTCATGTATCGGATCCCGTGATTCGGATCCCCAAGACCCGCTCCCAGAACCTCGCACTCTCTCCTTGTCGGATCCGCTCCCAAACGCCATGACCCGGCGCTGCTCGCATTGCAGCCACAATGGCCACAACTCCAGAACATGCCCCAACCGTGGGGTCAAGCTATTCGGAGTCCGATTAACCGATGGCTCGATCCGGAAGAGTGCTAGTATGGGTAATCTCACCCACTACGCCGGTTCCGGCTCCGGTCCCCTCCATGCCGGCTCTAATAATCCTGGTTCTCCCGGTGAAACTCCCGATCATGCCGCCGCCGCCGACGGTTACGCCTCCGAGGACTTCGTTCCCGGCTCGTCTTCTAGTTCCCGTGAAAGAAAGAAGGGCGTTCCATGGACTGAGGAGGAACATAGAATGTTTTTACTCGGATTGCAGAAGCTGGGAAAAGGTGATTGGCGTGGAATTGCACGGAACTATGTTATATCAAGGACGCCTACACAGGTGGCCAGTCACGCCCAGAAATATTTCATCAGGCAAAGCAATGTGTCCAGGCGGAAAAGACGGTCCAGCTTGTTTGATATTGTTGCAGATGAAGCAGCTGACACTCCAATGGTACAGCAAGACTTCTTGTCAGCTAACCAGTTACCGGCCGAAACAGAAGGCAATAACCCCTTGCCTGCTCCTCCTCCACTCGACGAAGAGTGTGAATCCATGGACTCCACAAACTCAAATGATGGAGAGCCTGCCTCATCAAAGCCTGAAAATACACAATCATCTTACCCAATGTTATATCCTACATATTATTCACCGGTGTTCCCGTTTCCTCTGCCGTATTGGTCAGGATACAGTCCAGAGCCCACCAAGAAGGAGACACATGAAGTGCTGAAGCCAACTGCAGTACATTCCAAAAGCCCTATCAATGTTGATGAACTTGTTGGCATATCAAAACTGAGTTTAGGGGAGTCTATTGGTGACTCTGCCCCCTCCTCTCTGTCTCTAAAACTTCTTGAAGAAGGGCCCTCTAGACAGTCAGCTTTTCACGCGACACCGGCATGTGACAGTTCAAATATGAACGGCAGTGCCATCCATGCCGTTTAA 1230 0.5057 MDSVVLLAVSLSLPICESRGRPNQKKKNIISQNNTTQHNTPFVQPPISCIGSRDSDPQDPLPEPRTLSLSDPLPNAMTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLTHYAGSGSGPLHAGSNNPGSPGETPDHAAAADGYASEDFVPGSSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADEAADTPMVQQDFLSANQLPAETEGNNPLPAPPPLDEECESMDSTNSNDGEPASSKPENTQSSYPMLYPTYYSPVFPFPLPYWSGYSPEPTKKETHEVLKPTAVHSKSPINVDELVGISKLSLGESIGDSAPSSLSLKLLEEGPSRQSAFHATPACDSSNMNGSAIHAV 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2059g00001 409 MobiDBLite consensus disorder prediction 31 46 - -
Mupr2059g00001 409 Pfam Myb-like DNA-binding domain 175 220 IPR001005 -
Mupr2059g00001 409 Gene3D - 174 226 - -
Mupr2059g00001 409 SMART sant 172 222 IPR001005 -
Mupr2059g00001 409 FunFam transcription factor MYB1R1 174 225 - -
Mupr2059g00001 409 MobiDBLite consensus disorder prediction 285 301 - -
Mupr2059g00001 409 PANTHER TRANSCRIPTION FACTOR KUA1 79 347 - -
Mupr2059g00001 409 ProSiteProfiles SANT domain profile. 176 224 IPR017884 -
Mupr2059g00001 409 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 168 224 IPR017930 -
Mupr2059g00001 409 ProSiteProfiles Myb-like domain profile. 168 220 IPR001005 -
Mupr2059g00001 409 MobiDBLite consensus disorder prediction 260 301 - -
Mupr2059g00001 409 CDD SANT 175 220 IPR001005 -
Mupr2059g00001 409 MobiDBLite consensus disorder prediction 121 177 - -
Mupr2059g00001 409 SUPERFAMILY Homeodomain-like 170 225 IPR009057 -
Mupr2059g00001 409 NCBIfam myb-like DNA-binding domain, SHAQKYF class 171 223 IPR006447 GO:0003677
Mupr2059g00001 409 MobiDBLite consensus disorder prediction 31 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2059g00001 Mupr-Chr2059 1031 6118 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr2059g00001 Myb_DNA-binding 1.6e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2059g00001 - - ccaj:109807943 699.893