Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2054g00009 ATGGCGGCGTCGCGGCGGCTCCGGGACCTCCAATCCCAAGCGTCGAACAAGATCTGCGTGGACTGCTCCCAGAAGAACCCGCAATGGGCGTCGGTATCGTACGGCGTGTTCATGTGCTTAGAGTGCTCCGGTAAGCACCGCGGCCTCGGCGTGCACATCTCCTTCGTGCGATCCGTCACCATGGACTCTTGGTCCGAAATCCAGATCAAGAAGATGGAAGCCGGAGGCAATGACAAACTCAACTCCTTCTTCGTCCAATACGGCATCCCCAAGGACACCGACATCATCGCCAAGTACAACTCCAACGCCGCCTCCGTCTACCGCGACCGCATCCAGGCCATCGCCGACGGACGCCCCTGGCGGGATCCCCCCGTCGTCAAGGAGACCGGCCGCTCCGCCACCAGGGGGAAGCCGCCGCTCGCCAACACCAACACCAACACCAACAACGGCTGGGATAATTGGGACACCGACGACGGTTTCGGATCCACCAAGGTCTCCGATCTTCGGCGGAACCAGTCCACCGGCGATGTGAGGGGCTTCGGCGGCGGAGGATGTGTGGCGAGGTCGAAGTCGACGGAGGATATCTTCGCGCGGACTCAATTAGAGGCCTCTGCTGCCAACAAGGAAGGGTTCTTCGCGAGGAAGATGGCGGAGAATGAATTGCGGCCGGAGGGGCTTCCGCCGTCGCAGGGCGGCAAGTATGTTGGATTTGGATCTAGCCCCCCTCCGACCCAGAGGAATAATCAGCAAAACGACTATTTGTCTGTCGTTTCTCAGGGAATTGGTAAATTATCGTTGGTTGCTGCTTCTGCGGCTCAGTCTGCTGCTAATGTTGTTCAGGCCGGGACAAAAGAGATCTCTGCTAAGGTGAAAGAGGGTGGTTATGATAACAAGGTCAATGAAACTGTTAATGTTGTCTCTCAGAAGACATCGGAGATTGGACATAGGACATGGGGTATAATGAGAGGGGTCATGGCATTGGCTTCACAGAAGGTTGAGGAATACACTAGAGATAACCCCAATTGGACTGCTGATAACTGGCAACGAAATGATAATGATAAAAATGGTTTCTATCAGGAGTTCAATCAAGAGAATAAAGGCCGGAATTCTTCTACCAGAGAAGGACAACATTCTTCAGGTGGACAGACTAATACTTATAACTCAAACTCTTGGGATGATTGGGACCACAAAGGTTCTAGGAAGGAAGAACCAGCTAAAGGATCAGCTCCTCAGTCATCAGGTGGGCAGTTTGATACTTATAACTCAAGCTCTTGGGATGATTGGGACCATGAAGATACAAGGAAGAAAGAACCAGCTAAAGGGTCAGCTGCCCATAGCAGTGATGATTGGGCTGGATGGGATAATGCCAAAGATGATGATATCTATGGTAGTGCACCTAATAATAAAGCTGTTGGTCATAATGAGAAGTCAGCTGCCATGGCGATTTCTCCCACACGTGTGGTCAACAGCTTGAGCTCCGCTAAGATGCGGGCGAGCACAGGGAAAGCTGTGATGGACAGAGAAACCCCCAAGAAGACGAAGTGCTGA 1548 0.5278 MAASRRLRDLQSQASNKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSEIQIKKMEAGGNDKLNSFFVQYGIPKDTDIIAKYNSNAASVYRDRIQAIADGRPWRDPPVVKETGRSATRGKPPLANTNTNTNNGWDNWDTDDGFGSTKVSDLRRNQSTGDVRGFGGGGCVARSKSTEDIFARTQLEASAANKEGFFARKMAENELRPEGLPPSQGGKYVGFGSSPPPTQRNNQQNDYLSVVSQGIGKLSLVAASAAQSAANVVQAGTKEISAKVKEGGYDNKVNETVNVVSQKTSEIGHRTWGIMRGVMALASQKVEEYTRDNPNWTADNWQRNDNDKNGFYQEFNQENKGRNSSTREGQHSSGGQTNTYNSNSWDDWDHKGSRKEEPAKGSAPQSSGGQFDTYNSSSWDDWDHEDTRKKEPAKGSAAHSSDDWAGWDNAKDDDIYGSAPNNKAVGHNEKSAAMAISPTRVVNSLSSAKMRASTGKAVMDRETPKKTKC 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2054g00009 515 MobiDBLite consensus disorder prediction 136 156 - -
Mupr2054g00009 515 Gene3D Arf GTPase activating protein 1 124 IPR038508 -
Mupr2054g00009 515 SMART arf_gap_3 1 120 IPR001164 GO:0005096
Mupr2054g00009 515 MobiDBLite consensus disorder prediction 339 515 - -
Mupr2054g00009 515 MobiDBLite consensus disorder prediction 339 392 - -
Mupr2054g00009 515 MobiDBLite consensus disorder prediction 483 497 - -
Mupr2054g00009 515 FunFam ADP-ribosylation factor GTPase-activating protein 1 129 - -
Mupr2054g00009 515 MobiDBLite consensus disorder prediction 424 443 - -
Mupr2054g00009 515 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 412 IPR044519 GO:0005096|GO:0016192
Mupr2054g00009 515 MobiDBLite consensus disorder prediction 409 423 - -
Mupr2054g00009 515 Pfam Putative GTPase activating protein for Arf 5 108 IPR001164 GO:0005096
Mupr2054g00009 515 CDD ArfGap_ArfGap1 3 117 - -
Mupr2054g00009 515 PRINTS HIV Rev interacting protein signature 35 52 IPR001164 GO:0005096
Mupr2054g00009 515 PRINTS HIV Rev interacting protein signature 16 35 IPR001164 GO:0005096
Mupr2054g00009 515 PRINTS HIV Rev interacting protein signature 56 77 IPR001164 GO:0005096
Mupr2054g00009 515 SUPERFAMILY ArfGap/RecO-like zinc finger 5 111 IPR037278 -
Mupr2054g00009 515 MobiDBLite consensus disorder prediction 501 515 - -
Mupr2054g00009 515 MobiDBLite consensus disorder prediction 118 156 - -
Mupr2054g00009 515 ProSiteProfiles ARF GTPase-activating proteins domain profile. 4 84 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2054g00009 Mupr-Chr2054 72477 81444 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2054g00009 5 91 C2H2 Transcription Factor Family AT4G21160 50.000 8.77e-23 97.8