Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2054g00006 ATGACTTCGTTCTTGAAGCCTGAGAATGCTCTCAAAAGGGCGGAAGAATTAATCAATGTTGGGCAGAAGCAGGATGCCTTGCAGACTCTTCATGACCTCATTACTTCGAAGAGATACAGAGCATGGCAGAAGACACTTGAAAGGATTATGTTCAAGTATGTGGAACTGTGTGTAGACATGCGCAAAGGGCGATTTGCAAAAGATGGGCTCATTCAGTATAGGATTATATGTCAGCAAGTGAATGTTAGTTCACTGGAGGAGGTGATCAAGCATTTCATGCACCTGTCAACTGAGAAAGCTGAACAAGCCCGCAGCCAGGCACAGGCATTAGAAGAAGCTCTGGATGTTGATGATTTGGAGGCAGATAAAAGGCCAGAGGACTTGATGTTGAGTTATGTCAGCGGTGAGAAAGGAAAAGACAGATCAGATCGGGAGCTTGTTACCCCATGGTTTAAATTTCTTTGGGAAACATACAGGACAGTGCTTGAAATATTGAGGAACAACTCAAAACTGGAAGCCTTATATGCTATGACAGCTCACCGAGCTTTTCAGTTCTGCAAGCAATATAAACGAACAACAGAGTTCCGCAGACTATGCGAAATAATAAGAAACCATTTGACCAATCTTAATAAATACCGTGACCAAAGAGACCGCCCTGATCTTTCAGCTCCTGAAAGCTTACAGCTGTATCTTGATACGAGATTTGAGCAGCTGAAAATTGCCACTGAACTTGAACTATGGCAGGAAGCCTTCAGATCAGTGGAGGATATACATGGATTGATGTGCTTGGTCAAGAAAACGCCCAAGCCATCCCTGATGGTTGTTTACTATGTGAAGCTGACAGAAATATTTTGGATATCATCAAGTCATCTGTATCATGCATATGCATGGTTCAGGCTCTTTTTATTACAAAAAAGCTTCAATAAGAATCTGAGTCAGAAGGATTTGCAATTAATAGCTTCGTCTGTTGTTCTGGCTGCACTTTCAGTGCCTCCTCATGATTGCACTCATGGGGCATCTCATTTGGAACTGGAGCATGAAAAAGAGAGAAATTTGAGGATGGCTAATCTCATTGGCTTTAATCTTGAAACTAAACCTGAAAGCAGAGAAATGCTCTCAAGGTCATCACTTCTTGCTGAACTGGCATCCAAGGGAGTGATGTCTTGCGTAACTCAGGAAGTGAAGGACATTTATCATCTTTTGGAACATGAATTTCATCCCTCAGATCTTGCAGTTAAAGCGCTGCCCTTGTTAACTAAAATCTCAAAGTTAGGGGGCAAGCTTTCCACTGCTTCATCTGTTCCAGAAGTCCAATTGGCTCAGTATGTTCCAGCACTTGAAAGACTAGCTACAATGAGGTTGCTGCAGCAGGTGGTGTCTAATGTGTACCAGACAATGAAGATTCAGACCTTGTCTGGGATGATCCCCTTCTTTGATTTTTCTGTAGTGGAGAAGATTTCTGTAGATGCTGTCAAGCAGAAGTTTGTATCAATGAAAGTTGACCACATGAGAAGTGTTGTGATTTTTTGCAAAACGAGTCTTGAGTCTGATGGCTTAAAGGATCACTTGGCCAATTTTGCTGAACAATTAAATAAGGCAAGACAAATGATTTATCCTCCTGACAGGAAACCATCAAAACTTGGAGCTTTACTTCCAAGTTTGACAGAGGTTGTGGCCAAAGAACACAAGAGGCTTCTTGCTCGAAAATCGATTATTGAGAAGAGGAAAGAAGAACAAGAACGACAGCTTCTTGAAATGGAACGGGAGGAGGAGTCGAAGAGGCTAAGATTGCAGAAAATAACCGAAGAAGCAGAACAAAGACGGCTCGCCACTGAGTATGAACAGAGGAAGAATCAGAGGATCCTCAGAGAGATAGAGGAGAGAGAAATTGAAGAAGCTCAAGCTTTACTCCAGGAGGCTGAAAAGCGTATTAAAAAGAAGGGGAAAAAGCCAATCATAGAGGGGGACAAAATAACCAAGCAGACCTTGATGGAGTTGACTTTGACTGAACAACTGCGGGAAAGACAGGAAATGGAAAAGAAGTTGCAAAAGTTAGCTAAAACCATGGATTATTTAGAAAGAGCGAAAAGGGAAGAGGCTGCTCCCCTGATTGAAGCTGCATATCAACAGCGTCTAGTGGAAGAGAGACTTCTTCATGAGCATGAGCAACAGCAAGAGGTTGAAGTCAGCAAACAAAGGCATGAGGGAGATCTTAAGGAGAAGGAGAGGCTTGGTCGAATGATGGGCAACAAGGAGATATATCAAGTGAGAGTTGTCAGTCACCGTCAAGCAGAGTTTAACAGATTGAGAAGAGAACGAGAAGAGCGAATCTCAAGGATTTTACAGTCGAGGAGACAGGAGAGGGAAAAAATGAGGAAGTTGAAATTTTATCTCAAGTTAGAAGAAGAGAGACAACAAAAATTGCGTGAGGAGGAGGAAGCTCGGAAACATGAAGAGGCTGAAAGGAGAAAGAAGGAAGAGGCTGAACGCTTAGCGAAGTTGGCTGAGATAGCTGAAAAGCAGAGGCAAAGAGAGAGGGAACTTGAAGAGAAGGAGAAACAAAGGAGAGAAGCACTGTTGGGCAGAGCTGCTGAACCAGCTCCTCCTGCCCGTCTATTGGAAACGGGATCTGCAGCTCCTGCTGTCGCCGCTGCAGCTGCTTCTCCAACCCCAGGGAAATATGTCCCGAAGTTCAGGCGAGAGAGAGCTGAAAGCACAGGAGCTCCTCCTCCAGAAACAGACCGCTGGAGTAATAGTAGCAGCAGGCCGGATGGTGACAGGTGGGGGCGTAATGATGATCGGAGAACCGCGTTTGGTTCTGGTGGGGGTTCAAGGTCATCTTCTACTTGGTCATCTTCCAGGAATGCC 2868 0.4411 MTSFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLTNLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKIATELELWQEAFRSVEDIHGLMCLVKKTPKPSLMVVYYVKLTEIFWISSSHLYHAYAWFRLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDCTHGASHLELEHEKERNLRMANLIGFNLETKPESREMLSRSSLLAELASKGVMSCVTQEVKDIYHLLEHEFHPSDLAVKALPLLTKISKLGGKLSTASSVPEVQLAQYVPALERLATMRLLQQVVSNVYQTMKIQTLSGMIPFFDFSVVEKISVDAVKQKFVSMKVDHMRSVVIFCKTSLESDGLKDHLANFAEQLNKARQMIYPPDRKPSKLGALLPSLTEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEQRRLATEYEQRKNQRILREIEEREIEEAQALLQEAEKRIKKKGKKPIIEGDKITKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQQRLVEERLLHEHEQQQEVEVSKQRHEGDLKEKERLGRMMGNKEIYQVRVVSHRQAEFNRLRREREERISRILQSRRQEREKMRKLKFYLKLEEERQQKLREEEEARKHEEAERRKKEEAERLAKLAEIAEKQRQRERELEEKEKQRREALLGRAAEPAPPARLLETGSAAPAVAAAAASPTPGKYVPKFRRERAESTGAPPPETDRWSNSSSRPDGDRWGRNDDRRTAFGSGGGSRSSSTWSSSRNA 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2054g00006 956 Coils Coil 562 603 - -
Mupr2054g00006 956 Coils Coil 668 698 - -
Mupr2054g00006 956 Gene3D - 352 510 - -
Mupr2054g00006 956 Gene3D - 269 342 - -
Mupr2054g00006 956 Coils Coil 616 650 - -
Mupr2054g00006 956 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Mupr2054g00006 956 MobiDBLite consensus disorder prediction 919 934 - -
Mupr2054g00006 956 MobiDBLite consensus disorder prediction 804 860 - -
Mupr2054g00006 956 MobiDBLite consensus disorder prediction 804 956 - -
Mupr2054g00006 956 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Mupr2054g00006 956 ProSiteProfiles PCI domain profile. 316 514 IPR000717 -
Mupr2054g00006 956 MobiDBLite consensus disorder prediction 940 956 - -
Mupr2054g00006 956 FunFam Eukaryotic translation initiation factor 3 subunit A 352 495 - -
Mupr2054g00006 956 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 928 IPR027512 GO:0005852
Mupr2054g00006 956 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 945 IPR027512 GO:0005852
Mupr2054g00006 956 Coils Coil 797 858 - -
Mupr2054g00006 956 Coils Coil 93 120 - -
Mupr2054g00006 956 Pfam PCI domain 373 509 IPR000717 -
Mupr2054g00006 956 Gene3D UVR domain 217 268 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2054g00006 1 954 Eukaryotic Initiation Factors Gene Family AT4G11420 73.285 0.0 1324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2054g00006 K03254 - gmx:100803796 1453.73