Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr204g00002 ATGCGTGGTTTAAAGCTAACTGAACGTTTCAAGAGCACCCAGGTTCATGCTCTCAGTTCTTCTTCATCAGAAACAAATGGTGGCAATAGCAACAAATCCTCAGAAACAAATGGTACTGGCTACAGCAACAAAGCCAAACCTCACAACAAGCTTAACAGAAACCGAACCTTAATGCCATCATGGTCAAAAACCAAATCCAGCACCAAGAACAACTCAGCCTCAGCGTTTGCAAACCTTGTCCCTCTTCACCTCCCTTCCACCGACACCATTGAACCATCCATAGAGCCTCACCTTAAGCCCATCAACCTTGTGGAGACCTTATCAGAGCTCTATCAGCGCGTGGAGTGCTGTTCACAGTCCACCAAAGCATCAGTGTGTGTGGAACAGTACTCTCTCTTGCGTGGCCTCGGTGACCAGAAAATACTAAGAAGATGTCTCAGGACAGCATGTCAAAATGCTGAGGATGTGCTCTCCAAGGTTGTGTTGTCTGCATGGTTGAGGTTTGAGAGGAGGGATGATGAGCTTGCTGATGTGTGTTCAATGGATTGTGGAGGCTACGTTCTTGAGTGTCCTAAGAAGAATTTGGAACACGGATTTAGTCTTTGTTCAGTTAATGATCACTGCCAGTGTCAGCAAGAGCCAAATCAGGAAACCTACTCCGAGAGTGTGTGTTTGTCAGATGAGGAAAGTGATGTTTTGTTTTGTGTTGGGAATGAAGAAATCAGTTGTGTTAGGTGCAGGATTGCTGCACTTTCAGACCCTTTTAATGCCATGCTCTATGGTGGCTTTGCTGAGTCCAAAATGAGCAAGATTGATTTCTCAGGAAATGGGATATGTCCAAAGGGGATGAAGGCAGTGGAGTTTTACAGCAGGACCAAAAGATTGGACCTATTCTGTCCAATGACCGTTTTGGAGCTTCTGTCCTTTGCCAATAGGTTTTGTTGTGAGGAGATGAGGTCTGCCTGTGATGCACATTTGGCTTCAGTTGTTGTGAATGTTGAAGATGCATTGGTGCTTATTGAGTATGGATTGGAAGAGAGAGCCACCCTTCTTGTAGGGGCTTGCTTACAAGTGTTGCTTAGGGAGCTTCCAAATTCTCTGTATAATCCAAAGGTGGTAAAAATATTCAGTAGTTTTGAGGCAAAGGAAAGGTTGGCCAATGTGGGGTGTGCCTCTTTCTTATTGTACTACTTCCTTAGTCATGTGGCTATGGAGGAAAGCATGGTGTCCAAAACAACAATGATGTTGTTGGAGAGAATGGGGGAGTGTGCTACAGAAAGATGGCAGAAGGCCCTAGCATTCCACCAATTGGGGTGTGTGCTGCTTGAAAGGAAAGAACACAAAGATGCTCAGCATTGTTTTGAGGCAGCAGTTGAGGAGGGTCATGTTTATTCTTTGGCTGGTGTGGCCAGAACCAAGCACAAGCAGGGTCAACCATATTCAGCCTATAAGTTAATTAGTTCTCTCATATTTGAGTATAAACCAGCTGGGTGGATGTACCAGGAGCGTGCACTGTACAATATGGGAAAGGAAAAGAGTTTTGATTTAGATGTGGCAACTGAATTGGATCCCTCCCTTTCATTTCCCTATAAATATAGAGCACTAGCAAAGGTGGAGGAGAAGCAGATAAAGGAAGGAATTATGGAGCTAGATAAGTTCATTGGCTTCAAACTCTCCCCTGATTGCTTAGAATTGAGAGCATGGTTGTATGTTGCACTTGAGGATTATGACAGTGCAGTCAGAGATATTCGTGCACTGCTAACCATAGAACCAAAGTACATAACTTTACATGGGAAGATCAAAGGGGAGTGCTTGCTCCATCTTCTAAACTGCGGAGTTCAGCAGAAGAGTCAGGCTGATTGCTGGATGCAATTATACCAACAATGGTCTTGTGTAGATGATATTGGTTCTTTGGCTATTATACATCAAATGCTAGAGAATGAGCCTGGAAAGAGCGTGCTAGAGTTTCGTCAGTCTCTACTCCTATTGAGATTAAACTGTCAAAAGGCTGCAATACACAGTTTGCGGTTGGCCAGAAACCATTGTAGCTCAATGCAAGAAAGGCTAATTTATGAAGGATGGATTCTATATGACACTGGCTATCGTGAAGAAGCTTTGGCAAGGGCTGACAGATCCATTGCAATTCAAAGGTCATTTGAAGCCTTTTTTCTAAAAGCATATGTGTTGGCAGATACAACTCTGGATCCTGAATCTTCTTCCTACGTTATTCAGCTTCTAAAAGAAGCACTTAAATGTCCTTCAGACGGTCTTCGCAAAGGACAAGTCAGTGTGATCTTTGATACTGTCCCCATTGCTAGTGAAGCATTGAATAACTTAGGGAGTATTTACGTGGATTGTGGTAAGCTTGAGCTTGCAAAAGAATGCTACAAGAATGCTCTTGCAATTAGGCACACAAGAGCTCATCAAGGTCTTGCACGCGTCTATCATCAGAAAAATCAGCGAAAAGCTGCATATGATGAGATGACCAAGCTAATTGAGAAGGCAGAGAGCAATGCCTCAGCATATGAGAAAAGATCAGAATACTGTGACCGTGAGATGGCAAGGACTGACCTTGATGTTGCAACTCAACTTGATCCTTTGAGGACTTATCCATATAGATACCGGGCAGCAGTGATGATGGATGAGCAAAAAGAATCTGAAGCAGTGGAAGAACTCACCAAGGCCATAAAATTCAAGCCTGACATGCAAATGCTTCATCTACGAGCAGCATTTTATGAGTCAATGGGGATCCTATCTTATGCTCTTCAGGATTGTCAAGCATCTCTTTGCTTAGACCCAAACCATGCAGGCACACTTGATCTATATCGAAGGATACAAAAGTTGAACTTTTAA 2853 0.4343 MRGLKLTERFKSTQVHALSSSSSETNGGNSNKSSETNGTGYSNKAKPHNKLNRNRTLMPSWSKTKSSTKNNSASAFANLVPLHLPSTDTIEPSIEPHLKPINLVETLSELYQRVECCSQSTKASVCVEQYSLLRGLGDQKILRRCLRTACQNAEDVLSKVVLSAWLRFERRDDELADVCSMDCGGYVLECPKKNLEHGFSLCSVNDHCQCQQEPNQETYSESVCLSDEESDVLFCVGNEEISCVRCRIAALSDPFNAMLYGGFAESKMSKIDFSGNGICPKGMKAVEFYSRTKRLDLFCPMTVLELLSFANRFCCEEMRSACDAHLASVVVNVEDALVLIEYGLEERATLLVGACLQVLLRELPNSLYNPKVVKIFSSFEAKERLANVGCASFLLYYFLSHVAMEESMVSKTTMMLLERMGECATERWQKALAFHQLGCVLLERKEHKDAQHCFEAAVEEGHVYSLAGVARTKHKQGQPYSAYKLISSLIFEYKPAGWMYQERALYNMGKEKSFDLDVATELDPSLSFPYKYRALAKVEEKQIKEGIMELDKFIGFKLSPDCLELRAWLYVALEDYDSAVRDIRALLTIEPKYITLHGKIKGECLLHLLNCGVQQKSQADCWMQLYQQWSCVDDIGSLAIIHQMLENEPGKSVLEFRQSLLLLRLNCQKAAIHSLRLARNHCSSMQERLIYEGWILYDTGYREEALARADRSIAIQRSFEAFFLKAYVLADTTLDPESSSYVIQLLKEALKCPSDGLRKGQVSVIFDTVPIASEALNNLGSIYVDCGKLELAKECYKNALAIRHTRAHQGLARVYHQKNQRKAAYDEMTKLIEKAESNASAYEKRSEYCDREMARTDLDVATQLDPLRTYPYRYRAAVMMDEQKESEAVEELTKAIKFKPDMQMLHLRAAFYESMGILSYALQDCQASLCLDPNHAGTLDLYRRIQKLNF 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr204g00002 950 Gene3D Tetratricopeptide repeat domain 851 949 IPR011990 GO:0005515
Mupr204g00002 950 MobiDBLite consensus disorder prediction 1 69 - -
Mupr204g00002 950 ProSiteProfiles TPR repeat profile. 773 806 IPR019734 GO:0005515
Mupr204g00002 950 SMART tpr_5 773 806 IPR019734 GO:0005515
Mupr204g00002 950 SMART tpr_5 560 593 IPR019734 GO:0005515
Mupr204g00002 950 SMART tpr_5 431 464 IPR019734 GO:0005515
Mupr204g00002 950 SMART tpr_5 902 935 IPR019734 GO:0005515
Mupr204g00002 950 SMART BTB_4 230 330 IPR000210 GO:0005515
Mupr204g00002 950 PANTHER ETO1-RELATED 1 947 IPR044631 GO:0010105
Mupr204g00002 950 MobiDBLite consensus disorder prediction 12 69 - -
Mupr204g00002 950 Gene3D Tetratricopeptide repeat domain 417 600 IPR011990 GO:0005515
Mupr204g00002 950 SUPERFAMILY POZ domain 222 327 IPR011333 -
Mupr204g00002 950 Pfam Tetratricopeptide repeat 774 802 IPR019734 GO:0005515
Mupr204g00002 950 Pfam Tetratricopeptide repeat 565 592 IPR019734 GO:0005515
Mupr204g00002 950 Coils Coil 818 845 - -
Mupr204g00002 950 Pfam BTB/POZ domain 227 326 IPR000210 GO:0005515
Mupr204g00002 950 Gene3D Potassium Channel Kv1.1; Chain A 221 367 IPR011333 -
Mupr204g00002 950 SUPERFAMILY TPR-like 517 710 IPR011990 GO:0005515
Mupr204g00002 950 Gene3D Tetratricopeptide repeat domain 601 850 IPR011990 GO:0005515
Mupr204g00002 950 SUPERFAMILY TPR-like 431 904 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr204g00002 Mupr-Chr204 18879 22894 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr204g00002 774 934 Glycosyltransferase AT3G04240 26.901 6.08e-08 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mupr204g00002 BTB 0.00032 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr204g00002 - - gmx:100790527 1659.81