Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2048g00006 ATGGACGTAATTGTCTCTAAGACTACTGAAACTGCACTGCAAATTGGAGAAGGTGTGATCAAACGACAAGTGGGCTACTTCTTTAATTACAATGACAAATTTGAAGAGGTGAAACATTACATTGAGATGCTGGATAATGTTAGGAAGAGGGTACAAAATGAAATCAATAATGCGGTAATGAATGCAGAAGAAATTGAAGATGACGTTCAACATTGGTTAAAACAGGTGGATGAGAAGATAAAAAAATATGAAAGTTTTATTCATGATGAATGCCATGCAAAGACAAGGTGTTCCATTGGTTTCTTTCCAAATAACTTACAGTTGAGGTATCGGTTAGGCAGGAATGCTACAAAGATGGTAGAGGAAATCAAAGCAGATGAACTTTGGACTAAAAGGTTTGATAAAGTTTCATATCAGGTACGCCCATCCATGGATGCTGCTTTGTCAAACACTGGTTATGAAAGCTTTGCATCAAGAACTAAAACTATGGAGATGATTATGCATGCACTGGAAGACTCTACTGTTAATAGGATTGGAGTTTATGGGGTTGGTGGTGTGGGTAAGACCACTTTAGTCAAAGAAGTTGCTAAGCAAGCTAAAGAAAAGAAGTTGTTCAATATGGTGGTTATGGCAAATATAACAAGAAATCCTGACATAAAAAACATTCAAGGACAACTGGCTGAGATGTTAGGAATGAGATTGGAAGAGGAAAGTGAGATTGGAAGAGCAGCTCACATTCAAAAGAGGTTAAAGAAAGAAAAGGAGAACACCCTCATAATCCTAGATGATCTTTGGGATGGGTTGGACTTTAATAGACTGGGGATTCCATCTAGTGACATTGATGATGGCAACCAAATACAAAAGGAAAAGTTACCTATCAATTTTGATAAGATGAAAACAGAAAAGTTATCTGGAAATCATAAAGGATGCAAAATTCTTCTAACATCTAGAAGTATAGAAGTATTATGTAATCAAATGGATGTGCAAAAATCTTACTCGGTAGGAATCCTTGATGAAAAGGAGGCAGTGACTTTGCTTAAGAAAGTGGCTGGAATACATGTCCAAAATTTTGTGTTTGATGAGAAAGCCATTCAAATTGCCAAAATGTGTGCTGGATTTCCTATTGCAGTAGTTTCCATAGGAAGGGCACTAAAGAATAAGAGCTCCTCTGTGTGGGACGATGTCTGCCGACAAATTAAAAGGCAGAGTTTTACAGAAGGGCAAGAATCTGTTGAGTTCTCTGTAAAGTTGAGCTATGATCATTTAAAAAACGAGCAACTTAAGCATATTTTTTTACATTGTGCTAGAATGGGAAATGATGCTTTGACTATGGACTTGGTGAAGTTCTGTATTGGTTTGGGTTTGCTTCAAGGAATTCACACAATTAGAGAAGCCAGAGATAGAGTAGAAGTGTTGATAGAAGAGCTAAAAGAATCAAGCTTGTTGGTGGAAAGTTACTCTAGTGACCGCTTCAACATGCATGACATTGTGCGTGATGTTGCTATTTCAATATCATCCAAAGAAAAGCATGTATTTTTTATGAAAAATGGCATATTAGATGAGTGGCCTCACGAAGATGAACTTGAAAGGTACACTGCTATTTTTTTACACTATTGTGACCTCAATGATGAGCTTCCGGAGAGTATATATTGTCCTAGACTTGAAGTCTTACATATTGACAATAAAAATGATTCTTTCGAAATACCAGACAACTTCTTTAAAGATATGATTCGACTCAGAGTATTGATATTGACTGGTGTTAATCTATCATGCTTACCCTCTTCAATTAAATACCTAAAAAAACTGAGAATGCTTTGTTTGGAGAGATGCATTCTAGGAAAGAACTTATCAACCATTGGAGAGTTAAGGAAATTAAGAATTCTTACTCTTTCAGGATCTGATGTTGAAAGTTTGCCCCTTGAATTTGGGAAATTGGATAAACTGCAACTTTTTGACTTGAGCAATTGCTCAACACTAAGAGTAATACCTTCCAATATAATATCAAGGATGAACATTTTGGAAGAGTTTTATATGAGAGACAGCTTGATTCTATGGGAGGCTGAGGAGAATATCCGAAGTGAAAATGCTAGTCTTTCTGAGTTGAGGCACTTGAATCAGTTACGAAATCTGGATATACACATTCAGAGTGTTGCCCATTTTTCGCAGAACTTGTTTTTTGACAAGTTGGATGGTTACAAGATTGTCATTGGTGAATTCAACATGCTTACAGTGGGAGAATTCAAAATCCCTGACAAGTATGAAATGGTGAAAGTTTTAGTGTTGAATCTAAAAGGAGGTATTGACATTCATTCTGAAAAATGGATTAAAATGTTGTTGAAAAGAGTTGAATATTTGCTCCTGGGAGAACTCAATGATGTTCATGATGTTTTCTATGAATTAAATGTTGAAGGTTTTCCAAATTTGAAACATTTGTCCATTGTAAACAATTTTGGCATTCAATACATTGTCAAGTCAATGGAGATGGCTTTTCCAAAATTGGAGTCCATGTGTCTTTACAAACTGGAGAATTTAGAGAAAATATGTGACAATCAGCTTACAGAGGCCTCTTTCTGCAGCTTAAAAATCATCAAGATTAAAACATGTGATCGATTGGAAAATCTTTTCACATTTTCCAATGTCAGACTCCTCACCGTGCTTGAAACAATTGAAGTGTGTGACTGTGGTTCTTTGAAGGACATAGTTTCTGCTGAAAGACAAACTCATACTATCAGTGATGACAAGATTGAGTTTCCTCAATTGCGACTTTTAACATTACAATCTTTACCAGCATTTACTTGTTTATATACCAACAATAACATGCCTTCTGATGCACAATCATTGGAAGATCAAGTGCCAGACAGGAACAAAGATATTACCACTGAAGTTGGGCAAGGTGCCAGCGATGCTTGCCTTTCACTTTTCAATGAAAAGGTTTCAATTCCCAAATTAGAAAGGTTGGAGTTGTCCTCAATCAACATCCTGAAGATATGGAGCGACCAATCTCTGCATTGTTTTCAAAATTTGCTTACATTGAATGTGACAGATTGTGGTAATTTAAAATATCTAATGTCATTTTCCATGGCTGGAAGTTTGGTGAATCTCCAAAGCCTTTTTGTAAGTGCATGTGAAATAATGGAGGATATATTTTGTCCAGTAGATGCAGAGCAGGAGATTGACATTTTTCCTAATTTGAAGAAAATGGAGATCATCTGCATGGAGAAACTTAATACCATTTGGCAACCCCATATTGGTCTTCATTCCTTTCGCAGTTTGGATTCTTTGATAATAAGAGAGTGCCACAAACTTGTTCTGATTTTTCCTAGTTATATGGGGAAAAGATTTCAGAGTCTTCAAAGTTTGACCATTACTAATTGTAAGTTAGTAGAAAACATATTTGACTTTGGAAATATTCCACAAACTTGTGATAGGAATGAAACAAACTTGCACGATATATTTCTAGAAAAGCTTCCAAATTTGGTGCACGTATGGAAGGATGACTCCGGTGAAATACCTAAATATAATAATCTGCAAAGCATAAGGATTGATAATTGCCCAAATTTAAATTATCTCTTTCCAATAACTGTTTCCAGTGACCTAGAAAAACTGAAAATCCTTGAGGTGCATGATTGCGGGGTAATGAAGGAGATTATTGCTTGGGACAAAGGTTCAAATGAAAATGCTATCACCTTTAAGTTCCCTCATCTAAAAGGTGTAATTTTGTCAGGATTAAATGAACTTGGGAGTTTCTACCGGGGAACTCACATTTTAGAGTGGCAATCATTGAAGGTACTGTCTATAGTCAATTGTTGCAAGTTGGAAGGGCTCACTACAGAAATCACAAATTCACAAGTGAAGCCAATTGTTTTGGCTACAGAAAAGGTGATATACAACTTGGAAGCCATGGTAATTAGCTTAAAGGAAGCAGAGTGGTTGCAGAAATATGTTGTTGATGTTCACAGAATGCACAAACTACAAATACTTTGTATTGTAGGATTTAAGAGTACTGAAATTCTCTTTTGGTTTCTTCATAGACTTCCCAATTTGGAAAGTTTAACATTGGGAGTTTCTCCCTTCAAAACGATTTGGACTCCTGAAAGCTTCATTTCACATGAAAAAGTAGGTGTTGTTATGCAACTTAAGAAATTGGAATTAATTGGTTTGTTCCGTTTGGAGAAGATAGGCTTTGAGCATGACCCCCTTCTTCGAAGGGTAGAGCATTTGGTTATTAATACATGTGTAAAATTGACAAGTTTAGCACCATGCTCAGTATCTTTCAGTCACTTAACACATTTGGAAGTGATGAATTGTATATTGATGAGGAATTTAATGACATGCTCAACTGCTAAAAGCTTGGTTCAACTCACAACCATCAAGGTAAGTTCCTGCCCAAAGATTGTGGAAATCGTTGCAGAAAATGAAGAGGAAAAAGTACAAGAGATTGAGTTTAGACATTTAAAATCTTTAGAATTGGTGTCTCTACAAAATCTCACAAGTTTCAGCAGTTCTGAGAGGTGTGACTTCAAATTCCCATTACTGGAAAATTTTGTGGTGAGTGAATGCCCTCAAATGACAAAATTCTCTCACGTCCAAAGTGCTCCAAACCTACGAAAAGTACATGTTGTCGCTGGAGAAAAAGACAGATGGTATTGGGAAGGTGATTTAAATGACACTCTACAAAATTTCTTCTCAAATCAGTTCCATACACTCCTGACATCCAGTTTGTTTGCTTTTAAGGTTTTTTTGGAATATGCAAAGCATATTCAACTTGTCGATTATCCTGAGATGAAAGGAATTTGGCATGGCAAACCTGCTTTTCCAGATAAGTTCTTTCACAGTTTAAAGAAATTGGAATTTAATGCAGCAAGTAAAAGAGATATTGTAATTCCATCTCATGTACTTCCTTACTTGAAGAGCTTAGAAGAATTAAATGTAGAGAGCTGCAAACCTGCGCAGATAATATTTGACATAGATTACAGTGAAGCCAATACCAAGGGAATAGTCTTTCGCTTGAAAAAACTTACTTTAAAGGACTTGCCAATTTTGAAATGTGTATGGAACAAAAATCCTCGAAGAATTGTCAGCTTTCCTAATTTGCAAGAAGTGGCTGTTAATGGTTGTGGAAGCTTGCCAACACTGTTCCCTTTGTCTCTTGGTAAAAATCTTGGGAAGCTTAAGAAACTTGAAATAGTTCAGTGTTACAAGTTGGTAGAAATTGTTGGAAAGGAAGATGCAATGGAACTTGGAACAACTGAAATGTTTGAATTCCCTTGTTTGTCCTTTCTAAATCTAGGTCATCTGCCACAGCTTAGCTTCTTTTATTCTGAAAAAGACCATCTGGAATGCCCCAGATTAGAAACCTTACATGTGTACTATTGTGGTATGTTGAAGCTATTCACATCAGTATTTGATAGTCCAATTAGCCAGCTACAACAACCTCTGCTCTTGGTTGAAAAGATTGTTCCCAAATTGAAAGAATTGACAATCAATGAGGAACATATTATGCTGTTGAGCAATGAACATTTGCCACAAGACCTCCTTTGCAAATTAAATGTTCTCCATCTATTCTTTGAGGATGGTATCAATAAGAAAGATACTTTGCCTTTCGATTTCCTTCACAACTTACCCAGTTTAGAACATCTTGAAGTAAATAAAGGCTTTGGTCTCATGGAAATATTTCCCTCTCAAAAACTCCAAGTTCATGACGGAATACTTGTGGGATTGAACAAATTAACCCTATCTGGACTTAATGAGCTGAAGTCAATAGGGTTAGAGCATCCATGGGTAAAGCCATTCGCTGAACAGCTTAAATTATTAAATGTTTTAAACTGCTCTCGGTTAGAAAAAATAGTGTGCGGTGCAGTATCTTTCATCAATCTGGAACACTTGTATGTTCATTTCTGTGGAAGGATGGAGTATTTATTCACATTTTCAACTGCCAAAAGTTTGGCGCAACTTGTGGACCTAAGTGTAACAAATTGTGAATCAATAAAAGAAATAGTAAAAAAAGAAGATGAAGTTGCTTCTGATGAGATCATATTTCGAAGGCTCACAGCATTAAGGCTGATTTCCTTACCAAGGCTAGTAAGCTTTTATTCAGGGAATGCCACTTTGGAATTCACATATTTGCAAGAAGCGTGGGTAGTTCAATGCCCCAAAATGAAAACTTTCTCTCAAGGACTCGTAAATGCGCCAATAATTTTCGGGATTTTCACTGCACTGGAGGATTGTCACTTGGACGATGATCTCAACACCACAATTGAGCGCTTGTATCACCAACAGGTAACCAATTCATCATCCAAATTGAAATACTATTTGTTTATATCTAACTAA 6330 0.3627 MDVIVSKTTETALQIGEGVIKRQVGYFFNYNDKFEEVKHYIEMLDNVRKRVQNEINNAVMNAEEIEDDVQHWLKQVDEKIKKYESFIHDECHAKTRCSIGFFPNNLQLRYRLGRNATKMVEEIKADELWTKRFDKVSYQVRPSMDAALSNTGYESFASRTKTMEMIMHALEDSTVNRIGVYGVGGVGKTTLVKEVAKQAKEKKLFNMVVMANITRNPDIKNIQGQLAEMLGMRLEEESEIGRAAHIQKRLKKEKENTLIILDDLWDGLDFNRLGIPSSDIDDGNQIQKEKLPINFDKMKTEKLSGNHKGCKILLTSRSIEVLCNQMDVQKSYSVGILDEKEAVTLLKKVAGIHVQNFVFDEKAIQIAKMCAGFPIAVVSIGRALKNKSSSVWDDVCRQIKRQSFTEGQESVEFSVKLSYDHLKNEQLKHIFLHCARMGNDALTMDLVKFCIGLGLLQGIHTIREARDRVEVLIEELKESSLLVESYSSDRFNMHDIVRDVAISISSKEKHVFFMKNGILDEWPHEDELERYTAIFLHYCDLNDELPESIYCPRLEVLHIDNKNDSFEIPDNFFKDMIRLRVLILTGVNLSCLPSSIKYLKKLRMLCLERCILGKNLSTIGELRKLRILTLSGSDVESLPLEFGKLDKLQLFDLSNCSTLRVIPSNIISRMNILEEFYMRDSLILWEAEENIRSENASLSELRHLNQLRNLDIHIQSVAHFSQNLFFDKLDGYKIVIGEFNMLTVGEFKIPDKYEMVKVLVLNLKGGIDIHSEKWIKMLLKRVEYLLLGELNDVHDVFYELNVEGFPNLKHLSIVNNFGIQYIVKSMEMAFPKLESMCLYKLENLEKICDNQLTEASFCSLKIIKIKTCDRLENLFTFSNVRLLTVLETIEVCDCGSLKDIVSAERQTHTISDDKIEFPQLRLLTLQSLPAFTCLYTNNNMPSDAQSLEDQVPDRNKDITTEVGQGASDACLSLFNEKVSIPKLERLELSSINILKIWSDQSLHCFQNLLTLNVTDCGNLKYLMSFSMAGSLVNLQSLFVSACEIMEDIFCPVDAEQEIDIFPNLKKMEIICMEKLNTIWQPHIGLHSFRSLDSLIIRECHKLVLIFPSYMGKRFQSLQSLTITNCKLVENIFDFGNIPQTCDRNETNLHDIFLEKLPNLVHVWKDDSGEIPKYNNLQSIRIDNCPNLNYLFPITVSSDLEKLKILEVHDCGVMKEIIAWDKGSNENAITFKFPHLKGVILSGLNELGSFYRGTHILEWQSLKVLSIVNCCKLEGLTTEITNSQVKPIVLATEKVIYNLEAMVISLKEAEWLQKYVVDVHRMHKLQILCIVGFKSTEILFWFLHRLPNLESLTLGVSPFKTIWTPESFISHEKVGVVMQLKKLELIGLFRLEKIGFEHDPLLRRVEHLVINTCVKLTSLAPCSVSFSHLTHLEVMNCILMRNLMTCSTAKSLVQLTTIKVSSCPKIVEIVAENEEEKVQEIEFRHLKSLELVSLQNLTSFSSSERCDFKFPLLENFVVSECPQMTKFSHVQSAPNLRKVHVVAGEKDRWYWEGDLNDTLQNFFSNQFHTLLTSSLFAFKVFLEYAKHIQLVDYPEMKGIWHGKPAFPDKFFHSLKKLEFNAASKRDIVIPSHVLPYLKSLEELNVESCKPAQIIFDIDYSEANTKGIVFRLKKLTLKDLPILKCVWNKNPRRIVSFPNLQEVAVNGCGSLPTLFPLSLGKNLGKLKKLEIVQCYKLVEIVGKEDAMELGTTEMFEFPCLSFLNLGHLPQLSFFYSEKDHLECPRLETLHVYYCGMLKLFTSVFDSPISQLQQPLLLVEKIVPKLKELTINEEHIMLLSNEHLPQDLLCKLNVLHLFFEDGINKKDTLPFDFLHNLPSLEHLEVNKGFGLMEIFPSQKLQVHDGILVGLNKLTLSGLNELKSIGLEHPWVKPFAEQLKLLNVLNCSRLEKIVCGAVSFINLEHLYVHFCGRMEYLFTFSTAKSLAQLVDLSVTNCESIKEIVKKEDEVASDEIIFRRLTALRLISLPRLVSFYSGNATLEFTYLQEAWVVQCPKMKTFSQGLVNAPIIFGIFTALEDCHLDDDLNTTIERLYHQQVTNSSSKLKYYLFISN 2109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2048g00006 2109 Gene3D - 337 428 IPR042197 -
Mupr2048g00006 2109 Gene3D Ribonuclease Inhibitor 1231 1448 IPR032675 -
Mupr2048g00006 2109 Gene3D Ribonuclease Inhibitor 1934 2065 IPR032675 -
Mupr2048g00006 2109 Gene3D Ribonuclease Inhibitor 509 690 IPR032675 -
Mupr2048g00006 2109 PRINTS Disease resistance protein signature 643 659 - -
Mupr2048g00006 2109 PRINTS Disease resistance protein signature 251 265 - -
Mupr2048g00006 2109 PRINTS Disease resistance protein signature 177 192 - -
Mupr2048g00006 2109 PRINTS Disease resistance protein signature 370 384 - -
Mupr2048g00006 2109 Coils Coil 459 482 - -
Mupr2048g00006 2109 Pfam NB-ARC domain 304 420 IPR002182 GO:0043531
Mupr2048g00006 2109 Pfam NB-ARC domain 160 285 IPR002182 GO:0043531
Mupr2048g00006 2109 Gene3D - 143 332 IPR027417 -
Mupr2048g00006 2109 Gene3D Ribonuclease Inhibitor 917 1230 IPR032675 -
Mupr2048g00006 2109 Gene3D Ribonuclease Inhibitor 1449 1929 IPR032675 -
Mupr2048g00006 2109 Coils Coil 41 82 - -
Mupr2048g00006 2109 SUPERFAMILY L domain-like 493 900 - -
Mupr2048g00006 2109 SMART AAA_5 174 347 IPR003593 GO:0016887
Mupr2048g00006 2109 SUPERFAMILY RNI-like 1156 1469 - -
Mupr2048g00006 2109 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1836 2074 - -
Mupr2048g00006 2109 SUPERFAMILY RNI-like 979 1216 - -
Mupr2048g00006 2109 Gene3D Ribonuclease Inhibitor 691 916 IPR032675 -
Mupr2048g00006 2109 SUPERFAMILY L domain-like 1598 1995 - -
Mupr2048g00006 2109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 434 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2048g00006 Mupr-Chr2048 14923 22838 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2048g00006 178 663 WRKY Transcription Factor Family AT5G45050 23.036 5.27e-07 53.1