Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2041g00004 ATGTCGTCTTGTTCATCGTCCAACACCCATTGGATACACGACGTGTTCTTGAACTTCAGAGGAGAAGACACGCGTAAGAGTTTCGTGTCTCATCTCTATGCTGCCCTCTCAAATGCGGGAATCAACACTTTCATTGATGACAAGATTCCCAAGGGAACCAAGTTGGGAGCAGAACTAGTGCGAGCAATACAAGGGTCTCGAATCTCCATCGTCGTTTTCTCCGCTAACTACACTTCATCTAGGTGGTGTCTTGATGAGTTGGTCAAAATCATGGAATGCCATAGAACTTATGGTCAGGTAGTTATGCCTATATTTTACGATATTGAGCCATCGGTTGTACGTCATCAAAGGGGTGCTTTTGGAGAAGGTTTGGAAGCACTTGCACAAAAATGTTTAATGGAAGGGACTCACCATGTGTTGAAGAGTTGGAAGAGTGCACTCGAGGAGGCAGGAAATTTTACCGGTTGGGACGCGAGGGCTTTCAGTGGAAGTGCCCTAGTGGAGGGAATTGTTGACTTCATTTTTGGAAGACTAGACATGGACTTGTTGTCTATTACCGAATTCCCAGTTGGATTAGAATCCCGTGTGCAACAAGTGGTTGAGTTTATTAATGGTCATTCAGGTAGAGGTTGTTTTGTAGGGATATGGGGAATGGGTGGATTGGGTAAAACAACCATGGCCAAAGTCATCTACAATCAATTTCGCCAGAGATTCAAGCGTAGAAGTTTTCTTGAAAACATTAGAGAAGTTTGTGAAAAGGATAGTAGAGGGTGTATTGATTTGCAGCAACAACTTCTTTCAGATCTCCTCAAAACAAAGAACAAGATACATAGCATTGTGATGGGGATAGCTATGATTGAGAACAGTCTTTGTGAAAAAAGGTCTCTTGTTATACTTGATGATGTAACTGAGTTTGAGCAATTAAAGGCCCTATGTGGAAATTGTAAATGGATTGGAAGAGGAAGTGTAATCATCATTACAACCAGAGATGTACGCCTACTTAATGTACTGAAAGTTAATCATATAGTCCATATTTGTAGAATAAAAGAAATGGACGAAAATGAGTCCCTAGAGCTTTTCAGTTGGCATGCTTTTAGAAAAAAAAGTCCAAGAGGAGACTTGATTAAACTCTCAATGGACATAGTTGATTACTGTGGAGGACTACCACTAGCCCTTGAAGTCCTTGGATCTTACTTATTTGAAAGGACAAAAGAAGAATGGGAAAGTGTATTGTCAAAACTAAAGGAAATTCCCAATGATAGAGTACAAGAGAAACTGAGAATAAGCTATGATAGTTTGGATACTAAGGAAAAGAATATATTCCTTGACATATGTTTTTTCTTTATTGGCAAGGACAGAGCCGTTGTTACAGAGATACTAAAAGGTTGTGACCTTTATCCCGAAATTGGAATAACAATCCTGGTTGAAAGGAGCCTGATAAAGCTTGAAAAGAATAACAAACTCAAAATGCATGATTTGCTGCGTGACATGGGAAGAGAAATTATTCGTCAAAGTTCTCCAGAGGAACCTGAGAAGCGTAGTCGATTGTGGATTCACCAAGAAGTACTAGATGTGTTGTCAGAACATACAGGAACAAAAGCAATTGAGGGCTTGGCTTTGAAGTTGCAAAGAACTAGTGGACTACACTTCAATACCAAAGCATTTGAGAAAATGAAGAAATTGAGACTTTTGCAACTTGATCATGTACAACTTGTTGGAGATTATGAGTATCTTAACAAAAACCTAAGATGGCTTTGTTGGCAAGGATTTCCTTTAAAGCACATACCAGACAAGTTGTATCAGAAAAATGTAATTTCTATTGAATTAAAATATAGTAATATTAGACTAGTATGGAAGGAGCCCCAGTTGCTGCCGAGGCTAAAGATCCTCAATCTTAGCCATTCAAGGAACTTGATGCGCACCCCTGATTTTTCAAAACTACCAAATCTTGCAAAACTCATTCTGGAAGATTGTCCAAGCCTGTCTGAGGTGCATCAATCGATTGGAGATCTAACTAATCTTCTTATGATAAATTTGAAGGACTGTACAAGCCTTAGCAATCTTCCAAGGAGGATTTATCAGTTGAAATCTTTGGAAACTCTCATCCTCTCTGGCTGTTCAAAGATTGACAAGTTGGAAGAAGATATAATGCAGATGGAATCCTTGACTACACTGATTGCAAAAGATACAGCTGTAAAAGAAATGCCTCATTCAATAATAAGATTAAAACGCATTGGATACATATCCCTTTGTGGACATGAAGGATTAGCACGTGATGTTTTTCCTTCTCTCGTATGGTCTTGGATGTCCCCAACGGCATATCTCGGATCTAGTACTCAACCATGTGGGAGCATGTCAACTTCTCTAATGTCCATGGATATACAGCATAATAATTTGGGTGACCTGTTGCCAATGCTTGGTGGACTTTCAAAACTTCGAAGTATTTTATTGCAGTATGACTCAAAGTTTAAACTAACCCAAAATTTAAAAAGAATTATGGATGGCTTATGTGATGTAAAATTTACTGAATCGGAAAGAGCATCATATGCCTCACAAATCTCAGAAAATGCCATGGAATCTTATTTGATTGGAATGGGAAGCTACGACCAAGTCATCAATATGTTTAGCAAGAACATATCAGAGGGACTGAGAACAAATGATTCTAGTGATTTTTCCCTTCCTGGTGACAACTATCCTTGCTGGTTAGCATATATAGGTAAGGGACATTCAGTACATTTTCAATTGCCTGAGAAATGTGATGGTTACATGAAGGGAATTATTTTATGTGTTGTTTATTCATCAACCTCTGAAAACATGGCTGCTGAATGTCTTACTGGTGTCTGGATTGTTAATTACACAAAGTGCACCATCCAAATATACCAGAAAGACACAATAATTTCCTTTAATGATGAAGATTGGCAGGGCTTAGTATCAAATCTAAGACCTAGTGACGATGTGGAGATTTTTGTAGCTTATGGGCATGGACCAACTGTTATGAAGATAGCTGTCTATCTTCTTTATTGA 3024 0.3866 MSSCSSSNTHWIHDVFLNFRGEDTRKSFVSHLYAALSNAGINTFIDDKIPKGTKLGAELVRAIQGSRISIVVFSANYTSSRWCLDELVKIMECHRTYGQVVMPIFYDIEPSVVRHQRGAFGEGLEALAQKCLMEGTHHVLKSWKSALEEAGNFTGWDARAFSGSALVEGIVDFIFGRLDMDLLSITEFPVGLESRVQQVVEFINGHSGRGCFVGIWGMGGLGKTTMAKVIYNQFRQRFKRRSFLENIREVCEKDSRGCIDLQQQLLSDLLKTKNKIHSIVMGIAMIENSLCEKRSLVILDDVTEFEQLKALCGNCKWIGRGSVIIITTRDVRLLNVLKVNHIVHICRIKEMDENESLELFSWHAFRKKSPRGDLIKLSMDIVDYCGGLPLALEVLGSYLFERTKEEWESVLSKLKEIPNDRVQEKLRISYDSLDTKEKNIFLDICFFFIGKDRAVVTEILKGCDLYPEIGITILVERSLIKLEKNNKLKMHDLLRDMGREIIRQSSPEEPEKRSRLWIHQEVLDVLSEHTGTKAIEGLALKLQRTSGLHFNTKAFEKMKKLRLLQLDHVQLVGDYEYLNKNLRWLCWQGFPLKHIPDKLYQKNVISIELKYSNIRLVWKEPQLLPRLKILNLSHSRNLMRTPDFSKLPNLAKLILEDCPSLSEVHQSIGDLTNLLMINLKDCTSLSNLPRRIYQLKSLETLILSGCSKIDKLEEDIMQMESLTTLIAKDTAVKEMPHSIIRLKRIGYISLCGHEGLARDVFPSLVWSWMSPTAYLGSSTQPCGSMSTSLMSMDIQHNNLGDLLPMLGGLSKLRSILLQYDSKFKLTQNLKRIMDGLCDVKFTESERASYASQISENAMESYLIGMGSYDQVINMFSKNISEGLRTNDSSDFSLPGDNYPCWLAYIGKGHSVHFQLPEKCDGYMKGIILCVVYSSTSENMAAECLTGVWIVNYTKCTIQIYQKDTIISFNDEDWQGLVSNLRPSDDVEIFVAYGHGPTVMKIAVYLLY 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2041g00004 1007 PRINTS Disease resistance protein signature 212 227 - -
Mupr2041g00004 1007 PRINTS Disease resistance protein signature 385 399 - -
Mupr2041g00004 1007 PRINTS Disease resistance protein signature 289 303 - -
Mupr2041g00004 1007 PRINTS Disease resistance protein signature 693 709 - -
Mupr2041g00004 1007 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 444 IPR027417 -
Mupr2041g00004 1007 Gene3D - 6 183 IPR035897 -
Mupr2041g00004 1007 SUPERFAMILY L domain-like 489 819 - -
Mupr2041g00004 1007 Gene3D - 350 434 IPR042197 -
Mupr2041g00004 1007 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 179 - -
Mupr2041g00004 1007 Pfam TIR domain 13 154 IPR000157 GO:0007165
Mupr2041g00004 1007 Gene3D - 184 343 IPR027417 -
Mupr2041g00004 1007 Gene3D Ribonuclease Inhibitor 539 854 IPR032675 -
Mupr2041g00004 1007 Pfam NB-ARC domain 193 433 IPR002182 GO:0043531
Mupr2041g00004 1007 ProSiteProfiles TIR domain profile. 11 178 IPR000157 GO:0007165
Mupr2041g00004 1007 SMART till_3 12 153 IPR000157 GO:0007165
Mupr2041g00004 1007 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 756 IPR044974 GO:0006952
Mupr2041g00004 1007 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 156 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2041g00004 Mupr-Chr2041 4999 11142 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2041g00004 13 742 WRKY Transcription Factor Family AT4G12020 29.467 7.78e-73 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2041g00004 - - gmx:100809413 1521.52