Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2040g00001 ATGGGAGAAGGGAACGGAAGGCAAAGGAAGGCGAAAGAGAAACGGACGGTGGCGATAGAAGCGACAGTCTCATCTCCATCTCCTCTCTTCTCCAGCGTTCATTTCTCCCGCCAATTACTAATCACATCACATCAGGGTTCCGCCGACATGGCCGATGCTCCGGCGAGTCCACCCGGCGGCAGCCACGAGAGCGGCGAGCACAGTCCCCGCTCCAATTTCCGCGAGCAGGACCGCTTCCTCCCCATCGCCAACATCAGTCGCATCATGAAAAAAGCGCTTCCTGCTAACGGAAAAATCGCCAAAGACGCGAAGGAAACGGTGCAGGAATGCGTCTCCGAGTTCATTAGCTTCATCACTAGCGAGGCGAGTGATAAGTGCCAGCGAGAGAAGCGAAAGACCATTAACGGCGACGATTTGCTTTGGGCAATGGGCACTTTAGGTTTCGAGGACTATATTGATCCGCTCAAGGTTTACCTCGGCGCTTACAGAGAGGGTGATTCCAAGGGTTCGACCAAGGGTGGAGATGCGTCTGCTAGGAGAGATGTTTATCCGAGCTCTAATGCCCAGCTTGTTCATCAAGGTTCTTTCTCACAAGGTGTTAATTATACGAATTCTCAGCCCCAGGCTCAACATATGATAGTTCCCATGCAAGGCCATGAGTAG 663 0.5279 MGEGNGRQRKAKEKRTVAIEATVSSPSPLFSSVHFSRQLLITSHQGSADMADAPASPPGGSHESGEHSPRSNFREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMGTLGFEDYIDPLKVYLGAYREGDSKGSTKGGDASARRDVYPSSNAQLVHQGSFSQGVNYTNSQPQAQHMIVPMQGHE 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2040g00001 220 PRINTS CCAAT-binding transcription factor subunit A signature 126 144 - -
Mupr2040g00001 220 PRINTS CCAAT-binding transcription factor subunit A signature 107 125 - -
Mupr2040g00001 220 PRINTS CCAAT-binding transcription factor subunit A signature 145 163 - -
Mupr2040g00001 220 MobiDBLite consensus disorder prediction 1 21 - -
Mupr2040g00001 220 MobiDBLite consensus disorder prediction 164 183 - -
Mupr2040g00001 220 ProSitePatterns NF-YB/HAP3 subunit signature. 110 126 IPR003956 GO:0005634|GO:0006355|GO:0043565
Mupr2040g00001 220 MobiDBLite consensus disorder prediction 1 17 - -
Mupr2040g00001 220 SUPERFAMILY Histone-fold 76 194 IPR009072 GO:0046982
Mupr2040g00001 220 FunFam Nuclear transcription factor Y subunit B-3 68 191 - -
Mupr2040g00001 220 Gene3D Histone, subunit A 66 199 IPR009072 GO:0046982
Mupr2040g00001 220 MobiDBLite consensus disorder prediction 44 76 - -
Mupr2040g00001 220 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 79 143 IPR003958 -
Mupr2040g00001 220 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 63 193 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2040g00001 Mupr-Chr2040 6849 10558 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2040g00001 50 218 CCAAT-HAP3 Transcription Factor Family AT2G37060 71.348 7.70e-80 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mupr2040g00001 CBFD_NFYB_HMF 1.3e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2040g00001 K08065 - zju:107432901 294.278