Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2039g00003 CCTTATTGTTGTTGTCTGTATTGTTTTTTCTTAATGGGAACTGAGGATGGGACCGGCGATGCTGATAAGACTGAATGCGGGGAACGAGTTCAGGGTTTGAAAAGTGAGGCCATGAATGGTGAGGTGGCAATTGCAGATGGGAATTGTGTTACTGAAGAGGTTCAGTGTTTGAAAAGTGAAGCCATGGATGATGGGGTGGCTTCTGCTGATGGAAATGGTGTTGCTGAAGAGGATAGGCTCTTGAAAAGTGAACCCTTTAGTAATGGGGTGGCAGTTGCAGATAAAGGGAACTCTGGTGGAGATGAATGTTTGCGAACTTATAAGAGGCGTAAGAAGTCAAGTTCAAAAGGCAAACTTGAGGAACAATGCAAAAAAGGCGTGGAAACTGCAAATCATATAGCAGATCAGGCTGTGAAGAAACCGTGTGATGTAGCTTTAGGCAATACTTCAGATGATTGTTCCCATGGACAGTGGGGAAATATTGTACTAAATCATTTATATCAGTCACTAGGTGATGGTAATGGTGGCATAGAGAGGTGCATAAAGGAAGCACTTATTCATCATCCTAAACTTAATCATGCCACTACAGTTACGGAAACTTTTAAAATTGACAAAGATGGACAAGAATGCTCTTTGCAATTTGAGCGGCTTTCTCATAAGTCAGGGAATGAAGCTAATGGGCATGCAGATGTCATGTGTAATGGATGTTCTAGTGAATTGCCTGGCCATGGTGTGACTGAGATGTGTCAACGTGTGCTCTGTAATGTCTTAACCTCAGAAAAATTCAGTTCATTATGTAAGGCTTTACTTGAAAATTTCCAGGGAATGAAGCCTGAAAGTGTATTTGACTTTACTGTCATGAACTCAAGGATGAAGGAGCAAGCTTATGAACAATCACCAACACTTTTCTTGTCAGATATTCAACAGGTTTGGAGAAAGCTTCAAGACACTGGTAATGAGATTGTTGCCCTTGCCAAGAGCCTCTCCAGCATGACAAGAACATCCTACTCTGAGCTGGTGGGAATTTCAGCACAAAGCACATTTCAAGATGAGAAACAAGAGTTGTACAACCGGGAACTTCACTCTCATATGAAACCAGAACAGACAGAAGAATGTGCCATGTACAAAATTTGCAGTTGCAGGCGTTGTGGAGAGAAGGCAGATGGCAGGGACTGTTTGGTTTGTGATTCATGTGAGGAGGTGTATCATGTGTCCTGTATTGAACCTGCAGTGAAAGAAATCATGCCCCACAAAAGCTGGTATTGTGCCAATTGTACTGCTAATGGGATTGGATCTCCACATGAGAATTGTGTGCTGTGTGAAAGGTTAAATGATGCAAAAACCCTGAACCACGTAATTGGTGATGAAAGCTTTCCTACAAATGAGGAAACACAAAATGAACTTGAAGAGAATTCTAATTGCACCTCCACTGGGATTCAAGTTTCCATAGGTGAGGAAAAAACACCAAATTGCAAAATATGTGGAAATGAAGTGGATGGCGGAAAAATAAAAATATGTGGTCATCGTTTTTGCTCCAATAAACACTACCATGTAAGGTGTTTAACAAATAAGCAGTTAAAGTCATTTGGTCACTGTTGGTTCTGCCCTTCTTGCTTATGCCGGGTTTGCTTCACTGATCAAGATGATGATCAAATTGTTCTCTGTGATGGCTGTGATCATGCATATCACATCTATTGCATGAAACCTCCACAGACTTCTATTCCAAAAGGGAAATGGTTCTGCAGAAAATGTGATGCTGGAATACAAGCAATCCGCCAGGCTAGAAAGGCATTCGAGAGTAACAAGTCCAGAAGAATCGGTGAAGATGATTCAAAGCCAAATGCTAATCTTGAAAAGAAGCACAAGAATAAACGTGTACGAGAATTGGAAGGAAGTGGAGCAATGGACATGCTTTTAACTGCAGCCAATACTCTGAATTTTGAGGAGAAAGAGGTGGCAATCCAGATTGAGTCACAGAGAACATGA 1986 0.4139 PYCCCLYCFFLMGTEDGTGDADKTECGERVQGLKSEAMNGEVAIADGNCVTEEVQCLKSEAMDDGVASADGNGVAEEDRLLKSEPFSNGVAVADKGNSGGDECLRTYKRRKKSSSKGKLEEQCKKGVETANHIADQAVKKPCDVALGNTSDDCSHGQWGNIVLNHLYQSLGDGNGGIERCIKEALIHHPKLNHATTVTETFKIDKDGQECSLQFERLSHKSGNEANGHADVMCNGCSSELPGHGVTEMCQRVLCNVLTSEKFSSLCKALLENFQGMKPESVFDFTVMNSRMKEQAYEQSPTLFLSDIQQVWRKLQDTGNEIVALAKSLSSMTRTSYSELVGISAQSTFQDEKQELYNRELHSHMKPEQTEECAMYKICSCRRCGEKADGRDCLVCDSCEEVYHVSCIEPAVKEIMPHKSWYCANCTANGIGSPHENCVLCERLNDAKTLNHVIGDESFPTNEETQNELEENSNCTSTGIQVSIGEEKTPNCKICGNEVDGGKIKICGHRFCSNKHYHVRCLTNKQLKSFGHCWFCPSCLCRVCFTDQDDDQIVLCDGCDHAYHIYCMKPPQTSIPKGKWFCRKCDAGIQAIRQARKAFESNKSRRIGEDDSKPNANLEKKHKNKRVRELEGSGAMDMLLTAANTLNFEEKEVAIQIESQRT 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2039g00003 661 PANTHER OS02G0192300 PROTEIN 317 474 - -
Mupr2039g00003 661 ProSiteProfiles Zinc finger PHD-type profile. 377 428 IPR019787 -
Mupr2039g00003 661 FunFam PHD finger protein EHD3 isoform A 267 429 - -
Mupr2039g00003 661 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 485 590 IPR013083 -
Mupr2039g00003 661 SMART PHD_3 490 539 IPR001965 -
Mupr2039g00003 661 SMART PHD_3 542 585 IPR001965 -
Mupr2039g00003 661 SMART PHD_3 379 426 IPR001965 -
Mupr2039g00003 661 Gene3D - 268 429 - -
Mupr2039g00003 661 ProSiteProfiles Zinc finger PHD-type profile. 537 587 IPR019787 -
Mupr2039g00003 661 SUPERFAMILY FYVE/PHD zinc finger 359 426 IPR011011 -
Mupr2039g00003 661 SUPERFAMILY FYVE/PHD zinc finger 539 590 IPR011011 -
Mupr2039g00003 661 Pfam PHD-finger 540 585 IPR019787 -
Mupr2039g00003 661 Pfam PHD-finger 380 427 IPR019787 -
Mupr2039g00003 661 MobiDBLite consensus disorder prediction 601 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2039g00003 Mupr-Chr2039 24982 33727 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2039g00003 539 605 C2H2 Transcription Factor Family AT3G01460 47.761 1.85e-14 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mupr2039g00003 PHD 4.3e-13 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2039g00003 - - gmx:100795906 1093.95