Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2028g00007 ATGGGTTGGCTTAGCAGAATTTTTAAAGGCTCCGACCAAAAGATTTCGGAAGGGCATTACCATAAAGAAGAGGATGCCGATTATTATTTGCCATCGACTTCAGGGGATGTTTGGAACCAGAACGAGAATGAAGATATAGATCGTGCTATTGCACTGTCTCTGGTGGATGAGAGTCGGAAACCAAGCAATGTAAATGACTACAAATCACAATTAGAAGAAGATGAACAACTTGCCAGAGCTATAGAAGAAAGCCTAAATATAGAGTCTCCTCCCAGATATGGAAATGAAAATATGTATCAACCAATTCAGTATTTCCCCATGGGGTCCAGGATTTGTGCTGGCTGCTATACTGAGATTGGTTATGGACGATATCTAAATTGCTTGAATGCATTCTGGCATCCTGAATGCTTCCGCTGCCGTTCTTGCAACCTACCAATCTCTGATTATGAGTTCTCCACATCTGGGAATTACCCTTACCATAAATCATGCTATAAGGAAAGCTACCATCCAAAATGTGATGTCTGCAAGCACTTCATTCCAACAAATCCTGCTGGTCTTATTGAATATAGGGCACATCCATTCTGGGTTCAGAAATATTGCCCTTCTCATGAACATGATGGTACTCCACGCTGTTGCAGCTGTGAGCGAATGGAGCCACAAGAGACAAGATATATTGCTCTTAAGGATGGCCGGAAGCTCTGCTATGAGTGTCTGGATTCTGCTATCATTGATACTAATCAATGCCAACCCCTCTATGCTGATATACAAAGATTTTATGAAAGACTAAATATGAAACTGGAACAGCAAATTCCACTACTTTTGGTTGAAAGACAAGCACTGAATGAAGCAAGAGAGGGAGAGAGGAATGGCCATTATCACATGCCGGAGACCAGAGGGCTCTGCCTCTCAGAGGAGCTCAGCACCATCTCGAGACGACCTAGACTTGGGACAGGAAACGGAGCAATGGACATGAGAACACAGCCATACAGAGTGACTCCACACTGCGATGTCACAGCAATTCTCATTTTGTTTGGTCTTCCAAGGTTGCTTACTGGATCGATCCTGGCTCATGAGATGATGCATGCATGGCTGCGGCTTAAAGGTTATCGGACTTTAAGTCAGGATGTTGAAGAAGGTATATGTCAGGTTTTGGCTCATATGTGGTTGGAGTCTGAACTTGGTTCTGCATCAGGCAGCAACTTTGTATCAGCCTCATCCTCATCTGCATCACATGCATCTGGAAAAGGTAAAAGACCTCAGTTTGAGAGGAAGCTTGGGGAGTTCTTCATGCACCAGATCGAATCAGACATTTCCCCTGTTTATGGAGATGGGTTTAGGGCTGGTCAAAAAGCAGTGCGTAAGTATGGTCTACAAAGGACCCTTCACCATATCAGGATGACGGGGACTTTTCCATTTTAA 1419 0.4383 MGWLSRIFKGSDQKISEGHYHKEEDADYYLPSTSGDVWNQNENEDIDRAIALSLVDESRKPSNVNDYKSQLEEDEQLARAIEESLNIESPPRYGNENMYQPIQYFPMGSRICAGCYTEIGYGRYLNCLNAFWHPECFRCRSCNLPISDYEFSTSGNYPYHKSCYKESYHPKCDVCKHFIPTNPAGLIEYRAHPFWVQKYCPSHEHDGTPRCCSCERMEPQETRYIALKDGRKLCYECLDSAIIDTNQCQPLYADIQRFYERLNMKLEQQIPLLLVERQALNEAREGERNGHYHMPETRGLCLSEELSTISRRPRLGTGNGAMDMRTQPYRVTPHCDVTAILILFGLPRLLTGSILAHEMMHAWLRLKGYRTLSQDVEEGICQVLAHMWLESELGSASGSNFVSASSSSASHASGKGKRPQFERKLGEFFMHQIESDISPVYGDGFRAGQKAVRKYGLQRTLHHIRMTGTFPF 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2028g00007 472 PANTHER PROTEIN DA1-RELATED 2 3 471 IPR045218 -
Mupr2028g00007 472 Gene3D Cysteine Rich Protein 103 169 - -
Mupr2028g00007 472 FunFam Protein DA1-related 1 106 165 - -
Mupr2028g00007 472 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 105 137 - -
Mupr2028g00007 472 Pfam Ubiquitin interaction motif 42 54 IPR003903 -
Mupr2028g00007 472 Pfam Ubiquitin interaction motif 72 85 IPR003903 -
Mupr2028g00007 472 Pfam Protein DA1 262 467 IPR022087 -
Mupr2028g00007 472 ProSiteProfiles LIM domain profile. 110 170 IPR001781 -
Mupr2028g00007 472 Coils Coil 64 84 - -
Mupr2028g00007 472 SMART uim 72 91 IPR003903 -
Mupr2028g00007 472 SMART uim 41 60 IPR003903 -
Mupr2028g00007 472 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 138 193 - -
Mupr2028g00007 472 ProSitePatterns LIM zinc-binding domain signature. 112 146 IPR001781 -
Mupr2028g00007 472 SMART lim_4 111 163 IPR001781 -
Mupr2028g00007 472 Pfam LIM domain 112 166 IPR001781 -
Mupr2028g00007 472 CDD LIM_DA1 112 164 - -
Mupr2028g00007 472 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 72 91 IPR003903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2028g00007 Mupr-Chr2028 65935 72256 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr2028g00007 DA1-like 2.2e-95 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2028g00007 - - gmx:100783253 860.136