Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2023g00001 ATGATGGAGTCGATGGAGTCATGTGTCCCACCGGGGTTTCGGTTCCACCCAACAGATGAAGAGCTTGTTGGTTATTATCTCAGGAAGAAAGTCGCTTCTCAGAAAATTGACCTTGATGTTATCAGAGAGATCGATCTATATCGTATTGAACCATGGGATCTCCAAGATAGATGCAGGATCGGGTATGAAGAGCAGAATGAGTGGTATTTCTTCAGCCACAAAGATAAAAAGTATCCAACAGGGACAAGAACTAATAGAGCTACCATGGCGGGGTTTTGGAAGGCAACAGGAAGAGACAAAGCAGTGTATGAAAGGACAAAACTAATTGGGATGAGGAAGACCCTTGTGTTCTACAAAGGAAGAGCCCCTAATGGACAGAAAAATATAAGTACTGAGGAAGGATGGGTTGTGTGCAGAGCCTTCAAGAAAAAACCCACGGGGCAAGCGAAGACTATTATTGAAGGATGGGACTCAAGCTACTTCTATGACGAAGCAAGTGTGGTAAGCACAGTGGTCGATCCAATTGATCTCATTTCAAGGCAGTCTCAGAGCTTTTTATCTCAAAATTTCATGTGCAAGCAAGAGTTAGAAGCAGATAACTTGAGCTGCATGCTTCAGGACCCATTTGTACAACTTCCTCAGCTAGAAAGCTCGTCTTTGCCATTAGTAAAGAGGCCAAGCACAGTGTCAGACAATAACGAAGATGAAGACACTCAAAACAGGTTATCCAACAACAGCACAAAGAAAGTCACTGATTGGAGAGCTCTTGACAAGTTTGTAGCCTCTCAACTGAGTCATGAAGACACCCATGAAAATAATGGACTCTCAAGCTTTGAAGTCCATGATGATAACCCTGACATGGCACTGCTGTTACTGCAGAGTAGTAGGGATGAAGGGAACAGGTTAAGCCCGTTTCTAAATACAAGCTCAGACTGTGATATTGGGATATGCGTATTTGAAAAA 963 0.4309 MMESMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQDRCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYERTKLIGMRKTLVFYKGRAPNGQKNISTEEGWVVCRAFKKKPTGQAKTIIEGWDSSYFYDEASVVSTVVDPIDLISRQSQSFLSQNFMCKQELEADNLSCMLQDPFVQLPQLESSSLPLVKRPSTVSDNNEDEDTQNRLSNNSTKKVTDWRALDKFVASQLSHEDTHENNGLSSFEVHDDNPDMALLLLQSSRDEGNRLSPFLNTSSDCDIGICVFEK 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2023g00001 321 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 237 - -
Mupr2023g00001 321 Pfam No apical meristem (NAM) protein 10 136 IPR003441 GO:0003677|GO:0006355
Mupr2023g00001 321 Gene3D NAC domain 18 146 IPR036093 GO:0003677|GO:0006355
Mupr2023g00001 321 ProSiteProfiles NAC domain profile. 9 164 IPR003441 GO:0003677|GO:0006355
Mupr2023g00001 321 MobiDBLite consensus disorder prediction 221 249 - -
Mupr2023g00001 321 SUPERFAMILY NAC domain 5 143 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2023g00001 Mupr-Chr2023 3826 6061 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2023g00001 2 320 NAC Transcription Factor Family AT2G18060 59.783 8.99e-143 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr2023g00001 NAM 2.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2023g00001 - - pvu:PHAVU_002G110900g 573.548