LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr2021g00007	ATGTCGTCTCCGTCGCCGGAGATTCCTCCTAGTCCTGACACTAACTCCCCTGCCGCTCCTTCTCCGTCGGAGACCTCTCCCGCAATTGACTCCACTAACTCCCCTCCTCCGCCCTCTGCCACCACCAATGCCACCGTTTCTCCTCCACCTCCGGATTTCGTCGTCAATCAGCAAAGCGAAACCAATAGCAACGGGTTGCCGAGGAGTACATTAAACGGAATAATTATAGGGGCCGTGTTAGGTTCAGTAGGTATGCTTATCATTGGGACCATTTTCTTCTGCTTGTATAGGAATTGGAAAAGGAAGAGAAGCCACAGCAACTACTCGCAATCGCCACTACCAAAAGCTGACATGGCTGGTGGCATACTTCAGCATTGGCAAGACAGTGTTCCTCCAACAGTAGATAGTAAAGTAGGCTTGCTGCCCAAGCCTCCTTCTGGGGGTTTAGTGAGTCAGCAACAGTCATCGGCTGGTCTCCCCACACCGGCTGTGAATTCATCGAGCACCAGCAGTAGTTTGGGGTCCGAGAAGGTGAAGCCATACATTTCCCCATCTCCTGGCATTTCCTTGGCACTATCTCAAAGCACTTTTACATATGATGAATTAGCTATGGCAACGGATGGATTCTCCAAATCAAATCTTCTTGGTCAAGGTGGTTTTGGCTATGTCCATAAAGGAGTTCTCCCAAATGGGAAAGTTGTTGCAGTCAAGCAATTGAAATCTGAGAGTAGACAGGGGGAGCGGGAGTTCCATGCGGAAGTCGAGGTCATTAGCCGTGTGCATCACAGACATCTTGTTTCCCTAGTTGGATACTGCATCTCAGACAGCCAGAGGATGCTTGTCTACGAGTACGTGCCTAACAATACACTAGAATTTCATTTGCATGGTAATCCCAAAATTATACACCGTGACATCAAGGCATCTAACATCCTTCTTGATAGTAATTTTGAGGCTAAGGTTGCAGATTTTGGACTTGCAAAATTTTCATCAGACACAGAAACCCATGTTTCTACTCGAGTGATGGGAACTTTTGGATACATGGCTCCAGAATATGCTGCTAGTGGGAAACTCACTGAAAAGTCAGATGTTTTCTCCTTTGGTGTTGTGCTTTTGGAGTTGATTACTGGACGAAAACCTGTCGATAAAACTCAACCATTCTTAGATGACAGCATGGTCGAATGGGCAAGGCCTTTACTGTCCCAAGCTCTGGAAAATGGCAACTTTAATGGACTTGTTGATCCAAGGTTGCCGACAGATTACAATCTTAACGATATGATCCGAATGACTGCTTGTGCTGCCACTTGTGTGCGCCATTCAGCCAGGCTCCGGCCTCGAATGAGCCAGGTTGTTCGAGCTCTGGAAGGAAATATTCCTCTAGAAGATCTAAATGAGGGGAGCACACCTGGACACAGCAGAGTTTTTGGTTCCTTTGAGAGTTCTAGTTATGATTGTGTCCAATACAGTGAAGACCTAAAGAAGTTCAAGAAGCTGGCACTGGAAAGCCAAGAGCAAGGCGTTAGTGAGTACAGTGGTCCCAGCAGCGATTATGGTCAACATCCATCTGTCTCTACCAGCTCGGGCCAGCAAAATACACAGGAAATGGAAATGGGGAATGTGAAGGGTAGCAACCTCATTCTGGGATGA	1644	0.472	MSSPSPEIPPSPDTNSPAAPSPSETSPAIDSTNSPPPPSATTNATVSPPPPDFVVNQQSETNSNGLPRSTLNGIIIGAVLGSVGMLIIGTIFFCLYRNWKRKRSHSNYSQSPLPKADMAGGILQHWQDSVPPTVDSKVGLLPKPPSGGLVSQQQSSAGLPTPAVNSSSTSSSLGSEKVKPYISPSPGISLALSQSTFTYDELAMATDGFSKSNLLGQGGFGYVHKGVLPNGKVVAVKQLKSESRQGEREFHAEVEVISRVHHRHLVSLVGYCISDSQRMLVYEYVPNNTLEFHLHGNPKIIHRDIKASNILLDSNFEAKVADFGLAKFSSDTETHVSTRVMGTFGYMAPEYAASGKLTEKSDVFSFGVVLLELITGRKPVDKTQPFLDDSMVEWARPLLSQALENGNFNGLVDPRLPTDYNLNDMIRMTACAATCVRHSARLRPRMSQVVRALEGNIPLEDLNEGSTPGHSRVFGSFESSSYDCVQYSEDLKKFKKLALESQEQGVSEYSGPSSDYGQHPSVSTSSGQQNTQEMEMGNVKGSNLILG	547

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr2021g00007	547	PANTHER	PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4	297	502	IPR047117	-
	Mupr2021g00007	547	MobiDBLite	consensus disorder prediction	147	177	-	-
	Mupr2021g00007	547	Gene3D	Transferase(Phosphotransferase) domain 1	291	464	-	-
	Mupr2021g00007	547	MobiDBLite	consensus disorder prediction	133	177	-	-
	Mupr2021g00007	547	MobiDBLite	consensus disorder prediction	505	538	-	-
	Mupr2021g00007	547	SMART	serkin_6	209	426	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr2021g00007	547	Gene3D	Phosphorylase Kinase; domain 1	182	284	-	-
	Mupr2021g00007	547	MobiDBLite	consensus disorder prediction	18	70	-	-
	Mupr2021g00007	547	FunFam	proline-rich receptor-like protein kinase PERK1	187	284	-	-
	Mupr2021g00007	547	ProSiteProfiles	Protein kinase domain profile.	209	459	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr2021g00007	547	SUPERFAMILY	Protein kinase-like (PK-like)	194	457	IPR011009	-
	Mupr2021g00007	547	FunFam	proline-rich receptor-like protein kinase PERK8	289	468	-	-
	Mupr2021g00007	547	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	300	312	IPR008271	GO:0004672\|GO:0006468
	Mupr2021g00007	547	MobiDBLite	consensus disorder prediction	505	547	-	-
	Mupr2021g00007	547	ProSitePatterns	Protein kinases ATP-binding region signature.	215	237	IPR017441	GO:0005524
	Mupr2021g00007	547	MobiDBLite	consensus disorder prediction	1	17	-	-
	Mupr2021g00007	547	MobiDBLite	consensus disorder prediction	1	70	-	-
	Mupr2021g00007	547	Pfam	Protein kinase domain	293	383	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr2021g00007	Mupr-Chr2021	41820	46388	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr2021g00007	5	527	Trihelix Transcription Factor Family	AT1G70460	44.840	1.94e-136	410

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-1	Mupr2021g00007		Pkinase	2.9e-24	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr2021g00007	-		-	ccaj:109808169	870.152