Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2015g00001 ATGTGTACCCAAATACTAGAGTTAAGGATAGGTGGTGTTGCGGATAAATCAACGATTGTGGATGAAGCAGTGAAGTACATAAAAGTTCTGCAGGAAAGCCTGGAAGAGTTAGAGAAAAAGAAACAAGAAAGGCTTCGATGTGTTTCACTCCCTGGGCCCCAGACAGTAGCTTTTGAAAAGACATGGGTTTCTCCAAATCTGGTCTTGAACACTTTCGGACAAGAAGCCCATTTCTGCATTTATACGGCCCATAAGCCCGGCCTCATGAACACCATAGCTTCTGTGCTCCACAAGCACAATATAGAGGTCCTAACTGCCACCATTTCCTCAAATCCTTGTGGAAACGGAAATACATCCATGATTCAAGTCCATGGAAAACAAGCAGATTCAGTGGAGGAAAGTTACAAGCAAGCGGCTGAAGAGATTATGCTATGGATCGCTTAA 444 0.4369 MCTQILELRIGGVADKSTIVDEAVKYIKVLQESLEELEKKKQERLRCVSLPGPQTVAFEKTWVSPNLVLNTFGQEAHFCIYTAHKPGLMNTIASVLHKHNIEVLTATISSNPCGNGNTSMIQVHGKQADSVEESYKQAAEEIMLWIA 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2015g00001 147 Coils Coil 20 47 - -
Mupr2015g00001 147 CDD ACT_UUR-ACR-like 80 110 - -
Mupr2015g00001 147 CDD bHLH_AtbHLH_like 11 38 IPR045239 -
Mupr2015g00001 147 ProSiteProfiles ACT domain profile. 77 147 IPR002912 -
Mupr2015g00001 147 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 14 146 IPR044278 GO:0003700|GO:0006355|GO:0009960
Mupr2015g00001 147 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 12 52 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2015g00001 Mupr-Chr2015 17808 18634 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2015g00001 49 147 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 32.432 4.92e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2015g00001 - - ccaj:109816148 149.828