Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr200g00001 ATGCTTGGGGACTCAGCTGTGTTGGGAGCAGGAGGAGGTGGCGGCGGAGAAGATGGTGCCTCCGCCGATGCAGTGGCGGCGCTGCCAGCTGGAGCCCACGACGGGGCGGTGGCCGCGACCGCTGGCGGACTTGGATCAAATTCCGGGGACGACGAAAGGGGTAGAATCGAAGAGGGTGAACGTAGCTTCGGCGGTAACCGGTGGCCACGACAAGAGACTTTGGCGTTGTTAAGGATACGGTCGGATATGGACGTGGCGTTTCGAGATGCAAGTGTTAAGGGTCCTTTGTGGGAAGAAGTATCCAGAAAAATGGCAGAGCTTGGGTATCACAGAAGTTCCAAGAAGTGCAAAGAGAAATTCGAGAACGTGTACAAGTACCACAAGAGAACGAAAGAAGGGCGAAGTGGGAAACAAGATGGCAAAACATATCGTTTCTTTGATCAATTACAAGCCCTTGAGAACCACACTCCAACACCCCATTCCCCCAACCCATCACCAAAACCACTACAATCAGCACCATCAAGAGTAGCAGCAACAACAACTGCATCAGTGTCACTACCGATTACAACAACAACAACAGTGTCACTACCAATACCAATTCCAGAAACAGTGGCAATGCAGCAGGTACTGTCCAACACCACTCTTACTAGTACTGTCCCTCATATCACTGTTCCATCAACAACAACACTCCCTATAACCATACCCCAACCCATTCTGACCACCCCATCAATAAACCTCACTATCCCTTCCTACCCTCCAACAAACCCTACCAATTTCCCTCCACCATCCACAGCAAACCCTACCCCACCACCCTCTTTCCCCACCGACACCCTCTCCAACTCCAGCTCCTCCTCCACCTCCTCCGACGAAACACTAGAAGGGAGGCGCAAGAGAAAGCGCAAGTGGAAGGACTTCTTCGAGAGACTAATGAAGGAAGTCATCGAGAAGCAAGAGGAGCTACAAAAGAAGTTCTTGGAAGCCATAGAGAAACGCGAGCACGACAGAATAGCAAGGGAAGAAGCATGGAGAGTGCAAGAGATGAAAAGAATCAATAGAGAAAGAGAAATCCTATCACAAGAAAGATCCATAGCCGCAGCCAAAGACGCTGCCGTTATGTCATTCCTACAAAAAATAGCCGAACAACAAAACCTCGGTCAAGCATTGAGTAACATCAACCTCGTACAACCGCCGCAACCGCCACCACCACAACTAAGTGCAGCACCACCTCCAGTGCAACAACCGCCACTAACGGCGGTTGTTACACAGCCGGTGGTGGTCCCACAACCACAACAACAAGTGATGATGAATACGGAGATAGTGAAGGTGGATAATAATAATAATAATAATAACAACAATAATGGGGAGAATTTCATGGCATCGAGTTCTTCAAGGTGGCCAAAGGTGGAGGTTCAGGCGTTGATAAAGCTTCGAACGAACCTGGATGCTAAGTATCAAGAAAATGGACCAAAGGGTCCCCTCTGGGAGGAGATCTCGGCCTCTATGAGGAAGATCGGGTACAACCGAAACGCCAAAAGGTGCAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAAAAAGTGAAGGAAAGCAACAAGAAGAGACCGGAGGATTCCAAAACATGCCCTTATTTCCACCAGCTGGACGCGCTGTACAGGCAGAAGCACAAGGCGGATAGCTCGGTGGTGAAGCCGGAGAGCACGGTGGCGCCGCTTATGGTGCGGCCGGAGCAGCAATGGCCACCTCAGCAGGATAGGGATATCACAATGGAAGACGTAGAGAACGAAGATGACGAGTATGAAGAAAGAGAGGGAGAGGATGAAGAAGACGATGAAGAAGATGAAGAGGGTAGTGGCGGTGGTGGTGGTAATTACGAGATAGTGGCAAACAAAACAAGTACTGCTTCAGCTGAATAG 1914 0.4979 MLGDSAVLGAGGGGGGEDGASADAVAALPAGAHDGAVAATAGGLGSNSGDDERGRIEEGERSFGGNRWPRQETLALLRIRSDMDVAFRDASVKGPLWEEVSRKMAELGYHRSSKKCKEKFENVYKYHKRTKEGRSGKQDGKTYRFFDQLQALENHTPTPHSPNPSPKPLQSAPSRVAATTTASVSLPITTTTTVSLPIPIPETVAMQQVLSNTTLTSTVPHITVPSTTTLPITIPQPILTTPSINLTIPSYPPTNPTNFPPPSTANPTPPPSFPTDTLSNSSSSSTSSDETLEGRRKRKRKWKDFFERLMKEVIEKQEELQKKFLEAIEKREHDRIAREEAWRVQEMKRINREREILSQERSIAAAKDAAVMSFLQKIAEQQNLGQALSNINLVQPPQPPPPQLSAAPPPVQQPPLTAVVTQPVVVPQPQQQVMMNTEIVKVDNNNNNNNNNNGENFMASSSSRWPKVEVQALIKLRTNLDAKYQENGPKGPLWEEISASMRKIGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYRQKHKADSSVVKPESTVAPLMVRPEQQWPPQQDRDITMEDVENEDDEYEEREGEDEEDDEEDEEGSGGGGGNYEIVANKTSTASAE 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr200g00001 637 MobiDBLite consensus disorder prediction 394 412 - -
Mupr200g00001 637 PANTHER FI21293P1 43 607 - -
Mupr200g00001 637 MobiDBLite consensus disorder prediction 391 412 - -
Mupr200g00001 637 MobiDBLite consensus disorder prediction 589 618 - -
Mupr200g00001 637 Pfam Myb/SANT-like DNA-binding domain 463 550 IPR044822 -
Mupr200g00001 637 Pfam Myb/SANT-like DNA-binding domain 66 152 IPR044822 -
Mupr200g00001 637 MobiDBLite consensus disorder prediction 154 180 - -
Mupr200g00001 637 MobiDBLite consensus disorder prediction 555 637 - -
Mupr200g00001 637 FunFam Trihelix transcription factor GT-2 465 526 - -
Mupr200g00001 637 MobiDBLite consensus disorder prediction 253 274 - -
Mupr200g00001 637 MobiDBLite consensus disorder prediction 245 298 - -
Mupr200g00001 637 CDD GT1 463 528 - -
Mupr200g00001 637 Coils Coil 589 609 - -
Mupr200g00001 637 ProSiteProfiles Myb-like domain profile. 463 521 IPR001005 -
Mupr200g00001 637 MobiDBLite consensus disorder prediction 1 21 - -
Mupr200g00001 637 ProSiteProfiles Myb-like domain profile. 66 124 IPR001005 -
Mupr200g00001 637 CDD GT1 66 131 - -
Mupr200g00001 637 Gene3D - 465 526 - -
Mupr200g00001 637 Gene3D - 68 129 - -
Mupr200g00001 637 MobiDBLite consensus disorder prediction 37 67 - -
Mupr200g00001 637 Coils Coil 303 330 - -
Mupr200g00001 637 FunFam Trihelix transcription factor GT-2 68 129 - -
Mupr200g00001 637 SMART sant 461 523 IPR001005 -
Mupr200g00001 637 SMART sant 64 126 IPR001005 -
Mupr200g00001 637 MobiDBLite consensus disorder prediction 50 65 - -
Mupr200g00001 637 MobiDBLite consensus disorder prediction 275 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr200g00001 Mupr-Chr200 1396 4184 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr200g00001 57 579 Trihelix Transcription Factor Family AT1G76880 49.723 6.44e-162 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mupr200g00001 Myb_DNA-bind_4 2.3e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr200g00001 - - pvu:PHAVU_007G079700g 782.326