Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2008g00012 ATGGCACAAGATCAGGTTGATTCCCTTCCAGAAAATGAGGATCTAGGGTTCCCAATCACTCAATTGCAACAAGACAACAGTGATAGTAACAGATATATGAGGGAACAATTCATGAATTGTATAGAGGAGCTTAAGAAGGAAAATGGAAACGTTATCGACAAGGTTTTCAAGTATGTAGACGAATACCTTAAAGATAATATTGTCGATAAGGATCAGATTTTGTTGTCGCAGTTACCTTGCGACGACAACTTGGTGGTGGATTCGTTGTTGTTGGGAATCATCGATAACCTTGGTAAAAGCGCAAGGGTGATGGTGACAAGTGGGTTAAAGGAGGAATGCTTGCACGTGTACACGAGTTGCCGGAGGGAATTTGTGATTGAGATTCTTTTTGCATTTGCATGGAGAGAGGTCAATGACATGGTGATGAAGACGCAGTATTCGGCAAAAGCTTTGTGGGTAGCTGATAGGATACTCTTACCAAATGAAAGGAGACTCTTTGAACGCGTCTTTGAAGGCTCTATTCTTTTTGAGGATGAGTACCCTTCATTAGATGGTTCCAGTTTTTGGAAGGGTTTGACCATTTACCCTTCATTAGGCACCACTGGAACAGATGAGTTCTGGTTTAAGAAGGGTATGGACATTTTGGGGGAGTTGTTTAATCTTACTTATGCTGTTAAGGATCAAGCCATTGTTCCCGATGGTAGGCTTCACCGAATTACCTTTGATGTGTTGGACTACACTGAGATGATACATCGTGATTGGAAAACTTTATTCCACGTCATGGTTAATAAAAAGGACAAGTTTTCACTTTATGGGCACATAGCCATGATAGCAAACCTGCTAGACAACAGTTTGGAAGCCATCTCCAAAACTTACAAAAACCTCACTTTGGGTTATGTTTTCATCATCAACAATCGGAGCTTCATAGAGCTAAGGGTAACAACGCGTGGATTGATACTTGTTTTTGCCGAGGATTGGCTCCAAAATAATTCAACAAAATTCCAACAAAACCTTGAACTCTATCAGAAAAGCTCGTGGAATAAGATTCTGAACTTTTTGAAGCTGGACATCAATGAGTCAGAGCCTAATGTCGTAGCTGAGTTAATGAAACACAAACTGTATTCCTTTAACGAACACTTTGATGAAATATGCAACGTTCAGGCTACGTGGTTTGTCTTGAATGAGCAGTTAAGGGGGCAAATATTAAAATCCATAGAAAACATCTTGTTGCCCGCATATGGAAACTTCATTTTGAAGTTGCAGGATTGTCTTGGTAATCACGCTAATGACTACATTAAGTATGGAATGTTTCAAATCAAAGATCGACTCAACAATTTGTTTCTTGTAAGGGATTCCACAGATGCTTTGATGACATGCAATGTTCAGTCTACTTGGTTTGTGTTTGATGAGCATCAAAGGAAACAAACAATAAGATCAATAGGAAACATCTTGTTGCTGGCATATGAAAACTTCTGTTGCTTTCTTTTCCTCTGA 1494 0.3949 MAQDQVDSLPENEDLGFPITQLQQDNSDSNRYMREQFMNCIEELKKENGNVIDKVFKYVDEYLKDNIVDKDQILLSQLPCDDNLVVDSLLLGIIDNLGKSARVMVTSGLKEECLHVYTSCRREFVIEILFAFAWREVNDMVMKTQYSAKALWVADRILLPNERRLFERVFEGSILFEDEYPSLDGSSFWKGLTIYPSLGTTGTDEFWFKKGMDILGELFNLTYAVKDQAIVPDGRLHRITFDVLDYTEMIHRDWKTLFHVMVNKKDKFSLYGHIAMIANLLDNSLEAISKTYKNLTLGYVFIINNRSFIELRVTTRGLILVFAEDWLQNNSTKFQQNLELYQKSSWNKILNFLKLDINESEPNVVAELMKHKLYSFNEHFDEICNVQATWFVLNEQLRGQILKSIENILLPAYGNFILKLQDCLGNHANDYIKYGMFQIKDRLNNLFLVRDSTDALMTCNVQSTWFVFDEHQRKQTIRSIGNILLLAYENFCCFLFL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2008g00012 497 PANTHER EXOCYST COMPLEX PROTEIN EXO70 84 173 IPR004140 GO:0000145|GO:0006887
Mupr2008g00012 497 SUPERFAMILY Cullin repeat-like 35 447 IPR016159 -
Mupr2008g00012 497 Gene3D Exocyst complex component Exo70 209 455 - -
Mupr2008g00012 497 Gene3D Exocyst complex component Exo70 19 182 - -
Mupr2008g00012 497 Pfam Exo70 exocyst complex subunit 225 444 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2008g00012 Mupr-Chr2008 92924 95524 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2008g00012 69 447 EXO70 exocyst subunit family AT5G58430 34.694 6.06e-61 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2008g00012 - - gmx:100795016 492.271