Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2008g00008 ATGGCTCACCACATTTATAGAACTAGGTGGTCAACCATAGCAACTCTCTTCCCAAGTCAAACCGCAACAATCTTCCTAATCGTGATGGAGAAAAACCACAAAGCAATATTTGGCTCTAAAAATGATCCCAAGGATCCATCCTTTGAAAATTTTAAGGTCAATGATGAAAGTTATGGTATTGCAGCTTTGCCTAGATTAAGGTGGTTGAATCATCTTGATTCTAAACTTAAGAAAGCTTCATTTACAAAAGAGGAAGAAGATAGGCTACTTATGGCTCACCATATTTATAGAACTAAGTGGTCAACCATAGCGACTCTCTTCCCAAGTCAATCGGGTAATGTTGTGAAGAAATAA 354 0.3757 MAHHIYRTRWSTIATLFPSQTATIFLIVMEKNHKAIFGSKNDPKDPSFENFKVNDESYGIAALPRLRWLNHLDSKLKKASFTKEEEDRLLMAHHIYRTKWSTIATLFPSQSGNVVKK 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2008g00008 117 ProSiteProfiles Myb-like domain profile. 73 117 IPR001005 -
Mupr2008g00008 117 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 117 IPR017930 -
Mupr2008g00008 117 PANTHER MYB PROTEIN-RELATED 65 116 - -
Mupr2008g00008 117 Gene3D - 74 117 - -
Mupr2008g00008 117 SUPERFAMILY Homeodomain-like 65 116 IPR009057 -
Mupr2008g00008 117 Pfam Myb-like DNA-binding domain 80 116 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2008g00008 Mupr-Chr2008 69123 71036 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2008g00008 65 116 MYB Transcription Factor Family AT1G69560 51.923 1.04e-14 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr2008g00008 Myb_DNA-binding 5.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2008g00008 K09422 - zof:122024602 69.3218