Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1977g00001 ATGCGCATCATCCGGGCGGTGGACGGCGAAGGGGCTGTTAGGTCCTTAACACAGATTTTCGCAGCGCTGTCCTGTTCTGTTGTTGTCAATGGGAATAATTCCCCGACTGGTCACATCATATCCACTACAATTGGAGGGAAAAATGGGAAGCCTAAACAGACTAGAAGTTACAGGGTAGAACGCATCTTGGGGATTGGGTCATTTGGAATTGTCTTCCAGGCTAAATGCTTGGAAACTGGGGAGCCAGTGGCCATTAAGAAGGTTTTACAGGACAAAAGATATAAGAATAGTGAGCTACAGTTAATGCGCATGATGGACCATCCAAATGTGATCTCTCTGAAGCATCGTTTCTTTTCCACTACGAGTGCAGATGAACTTTTTCTTAATTTGGTGATGGAATATGTTCCAGAGTCTATGCATCGAGTCACAAAGTTCTACAGTAATACTAATCAGAGAATGCCACTTCTCTATGTAAAACTTTACATGCACCAGATTTTCAGGGGGCTGGCTTATATCCACACTGTTCCTGGAGTTTGCCACAGAGATTTGAAGCCTCAAAATATACTGGTTGACCCTCTTACACACCAGGTTAAGATATGTGATTTTGGAAGTGCAAAAGTGCTGGTCAAAGGTGAAGCTAATATATCACATATATGTTCACTTTTCTATCGGGCACCAGAACTTATGTTTGGTGCCACTGATTATACTACTTCAATTGATATTTGGTCAGCTGGCTGTGTCCTCGCTGAACTGCTTTTGGGCCAGGTTCTTGGCACACCCACCCGGGAGGAAGTTCCCTGTATCAATCCAAACTACAATGACTTCAAGTTTCCACAGATATTCCATGAAAAAATGCCTCCAGAAGCAATTGATCTTACTGCCCGGCTTCTGCAGTATTCCCCTGGTCTTCGTTGTACTGCGCTAGAAGCATGTGCACACCCGTTCTTTGATGAACTCCGTGAACCCGATGCTCACTTGCCAAATGGTCGTCCATTTCCCCCTCTATTCAACTTTAAACAAGAGTTATCCGGAGCATCTCCAGAGCTTATTAGTAAGTTGATACCTGACCACGTGAACGTCGGTGGCACCGAAGATGATCATTAA 1104 0.4438 MRIIRAVDGEGAVRSLTQIFAALSCSVVVNGNNSPTGHIISTTIGGKNGKPKQTRSYRVERILGIGSFGIVFQAKCLETGEPVAIKKVLQDKRYKNSELQLMRMMDHPNVISLKHRFFSTTSADELFLNLVMEYVPESMHRVTKFYSNTNQRMPLLYVKLYMHQIFRGLAYIHTVPGVCHRDLKPQNILVDPLTHQVKICDFGSAKVLVKGEANISHICSLFYRAPELMFGATDYTTSIDIWSAGCVLAELLLGQVLGTPTREEVPCINPNYNDFKFPQIFHEKMPPEAIDLTARLLQYSPGLRCTALEACAHPFFDELREPDAHLPNGRPFPPLFNFKQELSGASPELISKLIPDHVNVGGTEDDH 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1977g00001 367 ProSiteProfiles Protein kinase domain profile. 57 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1977g00001 367 FunFam Glycogen synthase kinase-3 beta 41 136 - -
Mupr1977g00001 367 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Mupr1977g00001 367 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 27 359 - -
Mupr1977g00001 367 SMART serkin_6 57 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1977g00001 367 CDD STKc_GSK3 52 319 IPR039192 -
Mupr1977g00001 367 Gene3D Transferase(Phosphotransferase) domain 1 137 359 - -
Mupr1977g00001 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Mupr1977g00001 367 Gene3D Phosphorylase Kinase; domain 1 42 136 - -
Mupr1977g00001 367 Pfam Protein kinase domain 57 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1977g00001 367 ProSitePatterns Protein kinases ATP-binding region signature. 63 87 IPR017441 GO:0005524
Mupr1977g00001 367 SUPERFAMILY Protein kinase-like (PK-like) 52 343 IPR011009 -
Mupr1977g00001 367 FunFam Shaggy-related protein kinase kappa 137 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1977g00001 Mupr-Chr1977 392 9343 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1977g00001 58 324 Core Cell Cycle Gene Families AT1G76540 32.107 6.59e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Mupr1977g00001 Pkinase 2.7e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1977g00001 K14502 - gmx:100810237 611.683