Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr196g00001 ATGGATCTTCCTTTTCTTCTTCCGTCCTTTCTCTTCTTCTTCTTCTTCTTCTTCACTTCCCATCACGCAAATGCCCTCAATGACGCATTGTCCCTTCTCACCTTCAAACGCTTCGTCTATTCCGACCCTTCCAACCTTCTCGCCGGCTGGACCAACAACACTTCTTCAAATCTCTGCCACTGGCACGGCGTTGCGTGCGGCGGCGGCGGGAGCCTCTCCGGCAGAGTCACCACCCTCAACATAACCGGCCTTCGCGGCGGCGAATTGTCGCCCTCCGTCGGAGACGTGTCCGAGCTCCGCGTCCTTTCCCTCGCCGGAAACATGTTCTCCGGCGAGATTCCGGCGAGCATAGGGAATCTCCGGTTCCTCGAGGCTCTCGAGCTCCAAGGTAACAACTTCTCCGGGAGAGTCCCGAACCAGATGAATTTTACTTTTCTTCAATCTCTCCAAATTGTTAACCTCTCCGGCAATGCCTTCTCCGGTTCGATACCGAGCGAGTTGATTGGCTCTGAGAGCGTGAAAATCGTTGATTTATCGAATAATCAGTTTTCTGGTGCGGTTCCGGTGAACGGTAGTTGCGATTCCTTGAAGCATTTGAAGCTGTCGCATAACTTTTTGACTGGGGAGATTCCACCCCAAATTGGGAAATGTAGAAACTTGAGAACCCTTTTGGTTGATGGGAACATCTTGGAGGGTAGAATTCCTTCTGAGATTGGCCATGTTGTTGAGCTTAGAGTTCTAGATGTTTCTAGAAACTCCCTCACTGGAAGGGTCCCCAAGGAGTTGGCTAATTGTGTCAAACTGTCTGTGCTTGTGCTTACTGATTTGCTCGAGGATCGCAATGGAGGAGGCTTGGAGGATGGCTTTAGAGGAGAGTTTAATGCGTTTGTTGGGAACATGCCTCACCAAGTGTTGCTGCTTTCAAGTCTAAGGGTTTTGTGGGCGCCTAGAGCGAATCTTGGTGGCCGATTGCCTAGTGGCTGGTCGGATTTGTGCTCCTTGAGGGTGCTCAATTTGGCGCAGAATTATGTTACTGGTGTCGTGCCTGAGAGATTGGGGTTGTGTAGGAATTTAAGTTTCTTGGACTTGAGTTCTAATGATTTGGTGGGGTATCTGCCTTCATTGCAGCTTCAGGTTCCTTGTATGGTGTACTTCAATGTCAGCAGGAATAATATATCTGGCGTTCTTCAAGGATTTAGGAACGGTAGCTGTCGTGTGAGTGCACTAGACCCTTCATTCGTAGAATTGGATGGTTATTATGATTATGCATACTTTAATTTTCCTGTTTGGAGGTTTCAAAAGAATGCTCTTGTTGGATTGGGTTTTGAAGAGACTAACACTACTGTTGTTAGCCATGATTTCAGTTGGAACGGTTTTGTGGGATCCTTGCCTTTGTTCTCTCTTGGAGATAATCTTTTTACTGCAAATAGTAAAGTCTCCTATGTTCTGTCTCTCAATAATAATAAGTTCAATGGAACTCTACCGTATCAGTTAGTTTCAAACTGTAATGACCTCAAGGCATTGTCAATTAACTTGAGTGTGAACCAACTATCCAGTGGGAATTTGCAAGCATCACTTTTTGGGTGCCTGAAGTTGACAGATTTTGAAGCAGCATACAACCAGATTGATGGGTCAATTGGAGCTGGTGTAGGTAACTTGATGATGCTTCGGCATCTTGATTTAAGTGGGAACAAACTATCTGGATCACTGCCTAATCAGCTGGGAAACCTACAAAACATGAAATGGATGTTTCTGGGAGGAAACAATCTAACAGGGGAAATTCCTTCCCAACTTGGCCAACTGACTTCCCTTGCTGTTTTGAATCTGTCTCACAATGCTCTAGTGGGAACAATTCCTGCAAGTTTGTCAAAGGCCAAAAGTCTTGAAAAACTGTTTCTAGATCACAACAACCTTTCTGGGGAAATACCTTTAACTTTTTCTACTCTTTCCAATCTTGTTCAACTGGATGTTTCTTTTAACAATCTTTCTGGTCATATTCCTCAGCTCCAACACCCAAGTGACTGTGATTCCTATAAAGGAAATGCACACCTGCACTCTTGCCCCGACGCATCTTCTGACTCACCTGCTTCTCTTCCTGTCCCCCTTGAAATCCAGCATACGCATAGGCAGAGGAAATTAAGGACATTAGTTATTGCTGTGGTCACTTCTGCTTCTGTGGCTCTCTGCACGCTTCTTGGAATAGTACTGGTGATCTTTTCTGGAAGGAGTAAATTTGGTCGTCTTAGCAGTATTAGAAGGCGACAGGTAGTGACCTTTCAAGATGTTCCAACTGAATTGAGTTACGACAGTGTGGTCACAGCCACTGGAAATTTCAGCATCCGGTATCTAATTGGCACTGGCGGCTTTGGGTCAACATACAAGGCAGAACTTTCCCCAGGTTTTCTTGTTGCCATAAAGAGGTTGTCCATAGGTAGATTTCAAGGCATTCAACAGTTTGAAACAGAAATAAAGACATTAGGGAGAATTCGACACAAGAATCTTGTGACTCTTATTGGCTACTATGTAGGAAAGGCTGAAATGTTCTTAATTTACAACTACCTTTCTGGTGGCAATCTTGAAGCTTTCATACACGACAGGTCAGGGAAGAAAGTGCAGTGGCCAGTCATTTACAAAATAGCAAAAGACATAGCAGATGCCCTTGCTTTCCTTCATTACTCTTGTGTTCCTCGCATTGTTCACCGGGATATCAAACCTAGCAACATCTTACTTGATGAAGATCTTAATGCCTACCTGTCGGATTTTGGTTTGGCACGACTGCTTGAGGTATCCGAAACGCATGCCACCACTGATGTTGCAGGCACATTTGGTTATGTTGCACCAGAATATGCCACCACTTGCAGGGTTTCTGACAAAGCAGATGTTTACAGCTTTGGTGTAGTGTTATTAGAATTGATGTCTGGAAGAAAGTCACTTGATCCATCTTTTTCTGAGTATGGAAATGGATTCAATATCGTCCCATGGGCAGAGCTGCTAATGACCGAAGGCCGTTGTTCCGAGCTATTTTCATCTACTTTGTGGGAAGCAGGGCCTAAGGAAAAATTGTTGGGGCTTTTAAAACTAGCGTTAACATGCACTGAAGAGACTCTTTCCATTCGACCCTCAATGAAGCTGATGACTTGCAAAATGTTACAGGATCAGCAACTGCAAAGCCCTTATCATGATCAGTTGTATATTGCCACATGGAATCTCATCATAGTGGCAAGCAAACACATGAGCTGTTCCTGTTACTACAAAGCCTATGTTCCTCCTTTCACATTTGTGCAGTAA 3288 0.4474 MDLPFLLPSFLFFFFFFFTSHHANALNDALSLLTFKRFVYSDPSNLLAGWTNNTSSNLCHWHGVACGGGGSLSGRVTTLNITGLRGGELSPSVGDVSELRVLSLAGNMFSGEIPASIGNLRFLEALELQGNNFSGRVPNQMNFTFLQSLQIVNLSGNAFSGSIPSELIGSESVKIVDLSNNQFSGAVPVNGSCDSLKHLKLSHNFLTGEIPPQIGKCRNLRTLLVDGNILEGRIPSEIGHVVELRVLDVSRNSLTGRVPKELANCVKLSVLVLTDLLEDRNGGGLEDGFRGEFNAFVGNMPHQVLLLSSLRVLWAPRANLGGRLPSGWSDLCSLRVLNLAQNYVTGVVPERLGLCRNLSFLDLSSNDLVGYLPSLQLQVPCMVYFNVSRNNISGVLQGFRNGSCRVSALDPSFVELDGYYDYAYFNFPVWRFQKNALVGLGFEETNTTVVSHDFSWNGFVGSLPLFSLGDNLFTANSKVSYVLSLNNNKFNGTLPYQLVSNCNDLKALSINLSVNQLSSGNLQASLFGCLKLTDFEAAYNQIDGSIGAGVGNLMMLRHLDLSGNKLSGSLPNQLGNLQNMKWMFLGGNNLTGEIPSQLGQLTSLAVLNLSHNALVGTIPASLSKAKSLEKLFLDHNNLSGEIPLTFSTLSNLVQLDVSFNNLSGHIPQLQHPSDCDSYKGNAHLHSCPDASSDSPASLPVPLEIQHTHRQRKLRTLVIAVVTSASVALCTLLGIVLVIFSGRSKFGRLSSIRRRQVVTFQDVPTELSYDSVVTATGNFSIRYLIGTGGFGSTYKAELSPGFLVAIKRLSIGRFQGIQQFETEIKTLGRIRHKNLVTLIGYYVGKAEMFLIYNYLSGGNLEAFIHDRSGKKVQWPVIYKIAKDIADALAFLHYSCVPRIVHRDIKPSNILLDEDLNAYLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELMSGRKSLDPSFSEYGNGFNIVPWAELLMTEGRCSELFSSTLWEAGPKEKLLGLLKLALTCTEETLSIRPSMKLMTCKMLQDQQLQSPYHDQLYIATWNLIIVASKHMSCSCYYKAYVPPFTFVQ 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr196g00001 1095 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Mupr196g00001 1095 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 742 853 - -
Mupr196g00001 1095 ProSitePatterns Protein kinases ATP-binding region signature. 784 806 IPR017441 GO:0005524
Mupr196g00001 1095 PRINTS Leucine-rich repeat signature 601 614 - -
Mupr196g00001 1095 PRINTS Leucine-rich repeat signature 556 569 - -
Mupr196g00001 1095 Gene3D Ribonuclease Inhibitor 453 694 IPR032675 -
Mupr196g00001 1095 Gene3D Ribonuclease Inhibitor 22 86 IPR032675 -
Mupr196g00001 1095 Pfam Leucine Rich Repeat 556 577 IPR001611 GO:0005515
Mupr196g00001 1095 Pfam Leucine Rich Repeat 195 217 IPR001611 GO:0005515
Mupr196g00001 1095 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 190 277 - -
Mupr196g00001 1095 Pfam Leucine rich repeat 579 638 IPR001611 GO:0005515
Mupr196g00001 1095 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 854 1057 - -
Mupr196g00001 1095 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 228 1051 - -
Mupr196g00001 1095 ProSitePatterns Serine/Threonine protein kinases active-site signature. 898 910 IPR008271 GO:0004672|GO:0006468
Mupr196g00001 1095 SMART LRR_typ_2 601 625 IPR003591 -
Mupr196g00001 1095 SMART LRR_typ_2 649 671 IPR003591 -
Mupr196g00001 1095 SMART LRR_typ_2 553 577 IPR003591 -
Mupr196g00001 1095 SMART LRR_typ_2 146 170 IPR003591 -
Mupr196g00001 1095 SMART LRR_typ_2 96 120 IPR003591 -
Mupr196g00001 1095 SMART LRR_typ_2 331 355 IPR003591 -
Mupr196g00001 1095 SMART LRR_typ_2 241 265 IPR003591 -
Mupr196g00001 1095 SMART LRR_typ_2 193 217 IPR003591 -
Mupr196g00001 1095 Gene3D Transferase(Phosphotransferase) domain 1 854 1064 - -
Mupr196g00001 1095 FunFam Leucine-rich repeat receptor-like protein kinase 25 189 - -
Mupr196g00001 1095 ProSiteProfiles Protein kinase domain profile. 778 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr196g00001 1095 Pfam Protein kinase domain 783 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr196g00001 1095 Gene3D Ribonuclease Inhibitor 285 408 IPR032675 -
Mupr196g00001 1095 SMART serkin_6 778 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr196g00001 1095 Gene3D Phosphorylase Kinase; domain 1 741 853 - -
Mupr196g00001 1095 SUPERFAMILY RNI-like 82 394 - -
Mupr196g00001 1095 ProSiteProfiles Leucine-rich repeat profile. 555 578 IPR001611 GO:0005515
Mupr196g00001 1095 SUPERFAMILY L domain-like 300 670 - -
Mupr196g00001 1095 SUPERFAMILY Protein kinase-like (PK-like) 756 1043 IPR011009 -
Mupr196g00001 1095 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 444 696 - -
Mupr196g00001 1095 Gene3D Ribonuclease Inhibitor 87 276 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr196g00001 Mupr-Chr196 5772 10015 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr196g00001 25 1058 Receptor kinase-like Gene Family AT3G02130 43.513 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Mupr196g00001 Pkinase 1.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr196g00001 - - gmx:100795047 1737.24