Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1969g00005 ATGGGTAGCTCAAAGATATTTTTGGGACTAGTCACTAATTGCCACGTCATAGATTCTTGGAGTAAGCCCACAGCTAGTGCTCATCCCTGTCTTCAACCTCCTACCGTGTTCATCTCCTCACCCATCAAATCTAACAACATCATCATCGTGGCACCAAAATCAATCGCTATAAAGTCGCCTCAAATCATGTCCAAGGCTCGTGTCTACACCGATGTCAATGTTCTTCGTCCCAAAGAGTATTGGGATTATGAGTCTCTCACCCTTCAGTGGGGTGATCAAGATGATTATGAGGTTGTGCGTAAAGTGGGCCGGGGGAAATATAGCGAAGTTTTTGAAGGCATAAATGTTAATAACAATGAGCGCTGTATAATCAAGATTCTGAAACCTGTCAAGAAAATAAAGATTAAAAGAGAGATAAAAATACTTCAGAATATTTGTGGAGGCCTAAATATTGTCAAGCTTCTTGATGTTGTCAGAGATCAACATTCAAAAACTCCCAGTTTGATATTTGAGTATGTCAACAGTACAGATTTCAGAGTTTTGTATCCAACCTTGACTGATTATGACATACGCTATTACATATATGAGCTCCTTAAGGCCTTGGATTACTGCCATTCTCAAGGCATTATGCATAGAGATGTCAAGCCTCATAATGTCATGATAGATCACGAGTTACGAAAACTTCGCTTGATAGATTGGGGTCTTGCTGAATTTTATCATCCTGGAAAGGAATATAATGTTCGGGTGGCTTCAAGATACTTTAAGGGGCCTGAACTTCTAGTTGATTTGCAAGACTATGACTACTCATTAGACATGTGGAGCCTTGGCTGCATGTTTGCTGGAATGATATTTTGCAAAGAACATTTCTTTTATGGTCATGACAACCATGATCAGCTTGTCAAAATAGCTAAGGTGCTTGGGACTGATGAACTGAATGCATATCTTAATAAGTATCATTTGAAGCTTGATCCTCAACTCGATGCACTTGTTGGAAGACACAGCCGAAAGCCCTGGTCTAAATTTATCAATGCAGATAATCAGCATCTTGTGTCTCCTGAGGCAATTGATTTTCTTGATAAGCTCCTTCGATATGATCACCAGGACAGGCTAACAGCTAGAGAAGCAATGGCACATCCATATTTCTCTCAGGTAAGGGCAGCAGAAAGTAGCCGAACGAAGACACGTGTTTGA 1191 0.4039 MGSSKIFLGLVTNCHVIDSWSKPTASAHPCLQPPTVFISSPIKSNNIIIVAPKSIAIKSPQIMSKARVYTDVNVLRPKEYWDYESLTLQWGDQDDYEVVRKVGRGKYSEVFEGINVNNNERCIIKILKPVKKIKIKREIKILQNICGGLNIVKLLDVVRDQHSKTPSLIFEYVNSTDFRVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFCKEHFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLKLDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFSQVRAAESSRTKTRV 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1969g00005 396 CDD STKc_CK2_alpha 77 381 IPR045216 GO:0004674|GO:0006468
Mupr1969g00005 396 ProSitePatterns Protein kinases ATP-binding region signature. 102 125 IPR017441 GO:0005524
Mupr1969g00005 396 SMART serkin_6 96 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1969g00005 396 Gene3D Phosphorylase Kinase; domain 1 96 172 - -
Mupr1969g00005 396 PANTHER CASEIN KINASE II SUBUNIT ALPHA 61 391 IPR045216 GO:0004674|GO:0006468
Mupr1969g00005 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Mupr1969g00005 396 FunFam Casein kinase II subunit alpha 173 384 - -
Mupr1969g00005 396 SUPERFAMILY Protein kinase-like (PK-like) 64 385 IPR011009 -
Mupr1969g00005 396 Gene3D Transferase(Phosphotransferase) domain 1 173 381 - -
Mupr1969g00005 396 FunFam Casein kinase II subunit alpha 82 172 - -
Mupr1969g00005 396 ProSiteProfiles Protein kinase domain profile. 96 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1969g00005 396 Pfam Protein kinase domain 96 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1969g00005 Mupr-Chr1969 45543 51069 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1969g00005 94 381 Core Cell Cycle Gene Families AT1G76540 29.126 2.46e-41 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Mupr1969g00005 Pkinase 2.6e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1969g00005 K03097 - gmx:100810748 644.81