Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1967g00004 ATGGAAAACCAATTCTTTCTCAATGCTGGTGTGCCCCCTCAGCTGCATTTTGAGCCTTCACCACATCCTTGTCCACCCTCTTGGCAATCACTGTCTTCTGCCATGGATGTTCAAGTGACAGTTTTGAATTGTTCAACTGAGCAGCAGACACAGGATTGCTTCTATACCCCAACATGGGACAAGTCAACGGATCATGGTCTTCAGTTTGATTCAGCACTGAGCTCAATGGTGTCCTCTCCTGCAGCTTCCAATTCCAACATGTCAAGTGATAATTTTGTCATCAGGGAATTGATTGGAAAATTAGGAAACATTGGTGGTGGAGGTGGTGGTGGTGGTTCTGATGAGATCTCACCTCATTCTCAGCCTTTGGTTGGTGCATCCTCCTACATCAATGGTAATAACAGCACCAATACTTCATGCTACAGCACCCCTTTGAGTTCTCCTCCAAAGGTGAAGAACATGAACAAAAACAAGATCCCCACCACAGTGGTGAGCCACTTGGTGAAAGAGGTCATGCCCCCCAGCTTGGGGACATCAATGTCCTTGAATTCCAGTGTGGCAGAATTCTCAGCTGACCCTGGCTTTGCTGAGAGGGCTGCAAAGTTTTCTTGCTTTGGAAGTAGAAGTTTCAATGGCAGGACCACTCAATTAGGCCTCAATAATGCTGAATTGACTCAGAGACCTTCTCCATTGGTGGAAAATGGGAAGCTCCCTAGAGTCTCAAGTAGTCCCTCACTCAAAGTGCTTGGATCTCAAATGGGTAACCATGAGAGCAATAATTCCCCATTGCAGGACCTAATGGAAGTGGCCAATTCTCAAGAAGAATCCACAATCTCTGAACATACCCCTAATGGGGACACGGGGGTGAAACCTACCACTTATGTGAATTCTAGGAAAAGAAAAGGTCCATCCAAAGGAAAAGCCAAGGAAACCTCAACCTCTATTAATCCCCCTATGGCTGGTGAAGCCAGTGAAGACTCAAATGCAAAGCGCAGCAAGCCTAATGAAGGTGAGGGGAATGAAAATGGCCAAGTGAAGGCAGAGGAAGAGTCCAAAGGGGGTGCTAGTAATGCAAATGATGAGAAACAGAACAAGAGTAACTCAAAACCCCCTGAGCCTCCAAAGGATTACATTCATGTTAGAGCAAGAAGAGGTCAAGCCACTGATAGTCATAGTCTTGCAGAAAGAGTTAGGAGGGAGAAGATCAGTGAAAGAATGAAGCTTCTCCAAGATCTTGTCCCAGGTTGCAACAAGGTCACGGGTAAAGCACTCATGCTTGATGAAATTATAAACTATGTTCAGTCATTGCAGCGCCAAGTTGAGTTTCTGTCTATGAAATTGGCTTCTGTTAACACCAGGCTGGATTTTAGTATTGAGAGTCTAATCTCAAAAGATATATTTCAATCAAATAATACTTTGGCACACCCAATATTCCCATTAGATTCCTCAGCACCAGCCTTTTATGGGCAACACCCTCAGCCAAACCCAGCAATCCACAATAACATTCCTAATGGAACTGTGACCCACAACTCAGTGGACCCATTAGATACTGCTCTGTGCCAATTACCTCATCTAAATGGGTTTAATGAAGGTGGCTCTCAGTATCCAATAACATTCTCTGAAGATGACCTCCACACCATTGTTCAGATGGGATTTGGCCAAACTGCAAATAGGAAAACACCAATACAACCACCTCAGAGTTTCAACGGCTCAAATCAAATTAGTGTGATTTAA 1734 0.4446 MENQFFLNAGVPPQLHFEPSPHPCPPSWQSLSSAMDVQVTVLNCSTEQQTQDCFYTPTWDKSTDHGLQFDSALSSMVSSPAASNSNMSSDNFVIRELIGKLGNIGGGGGGGGSDEISPHSQPLVGASSYINGNNSTNTSCYSTPLSSPPKVKNMNKNKIPTTVVSHLVKEVMPPSLGTSMSLNSSVAEFSADPGFAERAAKFSCFGSRSFNGRTTQLGLNNAELTQRPSPLVENGKLPRVSSSPSLKVLGSQMGNHESNNSPLQDLMEVANSQEESTISEHTPNGDTGVKPTTYVNSRKRKGPSKGKAKETSTSINPPMAGEASEDSNAKRSKPNEGEGNENGQVKAEEESKGGASNANDEKQNKSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFSIESLISKDIFQSNNTLAHPIFPLDSSAPAFYGQHPQPNPAIHNNIPNGTVTHNSVDPLDTALCQLPHLNGFNEGGSQYPITFSEDDLHTIVQMGFGQTANRKTPIQPPQSFNGSNQISVI 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1967g00004 577 MobiDBLite consensus disorder prediction 556 577 - -
Mupr1967g00004 577 Pfam Helix-loop-helix DNA-binding domain 390 437 IPR011598 GO:0046983
Mupr1967g00004 577 Gene3D - 383 458 IPR036638 GO:0046983
Mupr1967g00004 577 MobiDBLite consensus disorder prediction 326 356 - -
Mupr1967g00004 577 CDD bHLH_AtBPE_like 376 461 - -
Mupr1967g00004 577 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 386 436 IPR011598 GO:0046983
Mupr1967g00004 577 Coils Coil 433 453 - -
Mupr1967g00004 577 MobiDBLite consensus disorder prediction 236 299 - -
Mupr1967g00004 577 FunFam Basic helix-loop-helix transcription factor 383 455 - -
Mupr1967g00004 577 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 384 455 IPR036638 GO:0046983
Mupr1967g00004 577 MobiDBLite consensus disorder prediction 220 377 - -
Mupr1967g00004 577 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 274 492 IPR024097 GO:0006355
Mupr1967g00004 577 SMART finulus 392 442 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1967g00004 Mupr-Chr1967 12549 16112 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1967g00004 1 541 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 42.599 2.44e-109 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr1967g00004 HLH 4.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1967g00004 - - gmx:100787699 932.554