Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1962g00009 ATGGCGCTTTCTTCAACGAAAGAGTTACCTCGAACATCAGCAACACTAACACCCACTATCGTACTCATCTTCTTGTGCACGCTGTTTCCGAGCCTGTGCACCGCACTTGGAAACACTAACACCGTGGGATCGGAGTTGCTGAAGGTTTCTCCCTCTGAATTCGCGGGGACAGTGGGAACTGTGATTGATGTGTTGCAAGATGTGACCTCTATTCTCTCCGAGTTCGGTTCTGTCTTCGGCGACTCGCTTCTTTCTAACGCCGTTTCGGACTGTCTCGATTTGGTTGACATGTCCTCCGATGAGCTCGATTGGTCTGTCTCCGCTACCCAGAGTCCCCAAGGGAAGCACAACAGCACAGGGAACCTAAGTTCAGACTTGAGGACATGGCTAAGTGCGGCACTAGCAAATCAAGATACATGCATGGATGGGTTCGATGGCACCAACGGCATAGTGAAGGGTCTAGTATCCACCGGGCTAGGCCAAGTGATGTCATTGCTGCAACAACTTCTCACACAGGTGAACCCTGTTTCGGATCACTTCTCTTTCTCTTCCGCACAGGACCAGTTCCCCTCGTGGGTTAGACCAGGGGACAGGAAGCTACTTCAAGCAAATGGGGTCCACGTGGATGCTGTGGTGGCCGCTGATGGGACCGGTGCCTTCTCCACGGTGATGGATGCGGTGCTGGCTGCGCCTAGTTACAGCATGAAGCGCTTTGTGATATACGTGAAGAAGGGGGTCTACTATGAGAACGTTGAGATCAAGAAGAAGAAGTGGAACCTTATGATGATTGGAGATGGCATGGATGCCACTGTTATTTCCGGCAACCGGAGCTTCATCGACGGTTGGACCACGTTCCGGTCAGCTACTTTTGCTGTGAGCGGCAGAGGATTCATAGCACGAGACATTACCTTCCAGAACACGGCAGGAGCAGAGAAGCACCAAGCAGTGGCACTAAGATCAGACTCCGACCTCTCTGTATTCTACCGATGTGGCATTTCGGGTTACCAAGACAGCCTCTATACCCACACCATGCGCCAATTCTACAGAGAATGCAAAATCAGCGGCACCGTGGATTTCATTTTTGGCGATGCCACTGCTCTTTTCCAAAACTGCCATATAGTAGCCAAAAAAGGGTTACCAAATCAAAAGAACACCGTCACAGCTCACGGGAGAAAAACCCCTGATGAACCAACTGGTTTCTCGATCCAATTTTGCAACATTTCTGCCGATTATGACCTTGTGAACTCGGTTAACTCCACTAACACGTATCTTGGCAGACCGTGGAAACCATATTCTAGAACAATTATCATGCAATCTTACATAAGTAATGTGTTGAGGCCTGAAGGGTGGTTGGAGTGGAATGGAGACTTTGCGTTGGACACATTGTACTATGCCGAGTACATGAATTATGGGCCAGGTTCAGGAGTTGCTGACCGGGTGAAATGGCCAGGGTACCATGTGATGAACGAGTCTAGCCAGGCTAGTAATTTCACGGTAACGCAATTTATTGAGGGGAATCTTTGGTTACCTTCAACGGGTGTAACGTTCACGGCTGGATTGGGCGTATGA 1569 0.4978 MALSSTKELPRTSATLTPTIVLIFLCTLFPSLCTALGNTNTVGSELLKVSPSEFAGTVGTVIDVLQDVTSILSEFGSVFGDSLLSNAVSDCLDLVDMSSDELDWSVSATQSPQGKHNSTGNLSSDLRTWLSAALANQDTCMDGFDGTNGIVKGLVSTGLGQVMSLLQQLLTQVNPVSDHFSFSSAQDQFPSWVRPGDRKLLQANGVHVDAVVAADGTGAFSTVMDAVLAAPSYSMKRFVIYVKKGVYYENVEIKKKKWNLMMIGDGMDATVISGNRSFIDGWTTFRSATFAVSGRGFIARDITFQNTAGAEKHQAVALRSDSDLSVFYRCGISGYQDSLYTHTMRQFYRECKISGTVDFIFGDATALFQNCHIVAKKGLPNQKNTVTAHGRKTPDEPTGFSIQFCNISADYDLVNSVNSTNTYLGRPWKPYSRTIIMQSYISNVLRPEGWLEWNGDFALDTLYYAEYMNYGPGSGVADRVKWPGYHVMNESSQASNFTVTQFIEGNLWLPSTGVTFTAGLGV 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1962g00009 522 PANTHER PECTINESTERASE 40 510 - -
Mupr1962g00009 522 ProSitePatterns Pectinesterase signature 2. 353 362 IPR033131 -
Mupr1962g00009 522 Pfam Plant invertase/pectin methylesterase inhibitor 26 158 IPR006501 GO:0004857
Mupr1962g00009 522 Pfam Pectinesterase 209 506 IPR000070 GO:0030599|GO:0042545
Mupr1962g00009 522 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 166 IPR035513 -
Mupr1962g00009 522 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 175 IPR035513 -
Mupr1962g00009 522 FunFam Pectinesterase 32 175 - -
Mupr1962g00009 522 SUPERFAMILY Pectin lyase-like 207 519 IPR011050 -
Mupr1962g00009 522 CDD PMEI-like_4 19 177 - -
Mupr1962g00009 522 FunFam Pectinesterase 203 520 - -
Mupr1962g00009 522 Gene3D - 207 522 IPR012334 -
Mupr1962g00009 522 SMART PMEI_2 5 172 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1962g00009 Mupr-Chr1962 18936 22343 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1962g00009 22 520 Carbohydrate Esterase AT3G43270 63.883 0.0 702