Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1945g00004 GCGGCTGGTAGTTTTAATATTGTAGTGCAGATATACAAATTAAGAAATGGTGTAAGCAATTGTTGCAGTGCTTGTAAGACAAGGAAGCGCATCACATCGATGTCGTCCTCCAACAGCCACTGGATCCACGACGTGTTCTTGAGCTTCAGAGGAGACACGCGTAGGGTTTTCGTGTCTCATCTGGACGCAGCCCTCTCAAATGCGGGAGTCAAAACTTTCATTGATCATAAGCTCGAAATGGGAAGGGAGTTGGGAGAAGAACTAGTGCGAGGCATAGAAATGTCTCGGATATCCATCCCCGTTTTATCCGCTAACTACACTTCATCAAGGTGGTGTCTTAATGAGCTCGTCAAAATCATGGAATGCCGTAGAACTTACGGCCAGCTGGTTCTGCCTCTATTTTACGATGTCGATCCAACCCATGTACGTCATCAAACGGGTGTCTTTGGAGAACGCTTGGAAGAACTCATACAAAAGTGTTCACTGGAAGGAACGCACGATGTGTCTTGGCGTTGGAAGAGGGCACTCAAGGAAGCAGCAAATTTGATCGGTTGGGATGCCACCAATTTCAGGAGTCATGGTGACCTAGTGAACAAAATTGTTGAGGAGATTCTTAAAAGACTTGACAACGACCTAATGCCTGTTCCCGAATTCGTAGTTGGATTAGAATCCCGTGTGGAAAAAGTGATTAGGTGTATTAATGGTCAATCAGGAAGAGGTTGTGTTGTAGGGATCTGGGGAATGGGTGGATCGGGTAAAACAACCTTGGCCAAAGTCATCTACAATGAAATTCGCCTGCGATTTACGCGTAGAAGTTTCATTGAAACAAATAATAGAGGGCATATTGATTTGCAAGAAAAACTTCTTTCAGACGTCCTAAATACAAAGGTCAAGATACATAGCATTGCGATGGGGATAACTATGATCGATCAAAGACTTAGTGGAGAAAGGGCTCTCATTGTACTTGATGATGTGACTGAGTTTCAGCAATTAAAAGCATTAAGTGGAAATGGTAAATGGATTGCTGCAGGAAGTGTAATCATCATTACAACCAGAGATGTACGCCTACTGAACCTTCTTAAAGTTGATTATGTTTATACAATGGAGGAAATGAACGAAAATGACTCCCTTGAGCTTTTTAAATGGCATGCTTTTGGAGAAGAAAAACAAAGAGAAAACTTCAATGAACTTGCAAGAAATGTAGTTGCTTATTGTGGAGGACTACCACTAGCTCTTGAAGTCCTTGGTTCTTATTTGATTAGGAGGACAAAGAAAGAGTGGCAAAGTGTATTGTCAAAACTAAAAATAATTCCCGATGATCAAGTTCAAAAGAAATTAAGAATAAGCTTCGATGGTTTAAGCGATCACATGGAAAAGAATATATTTCTAGATGTATGCTGTTTCTTTATTGGTAAAGACCGAGCCTATGCTACGGAGATACTAAATGGCTGTGGACTGCATGCTGATATTGGAATAACAGTTCTCATAGAGCGTAGCCTCATAAAAGTTGAAAAGAATAACAAACTGGGAATGCATCCTTTGCTACGAGAAATGGGAAGAGAGATAATTTGTGAAAGTTCAAGAAGCGAACCTGGTAAGCGCAGTCGATTGTGGTTTCATGAGGATGTGATTGAAGTATTGACAAAGAATATTGGGACAGAAATTATTGAGGGATTGAGTTTGAAGTTGCATTTCACCAGCAGAGATTGCTTCGAAACTTATGCTTTTGGGGAAATGAAGAGATTGAGATTGTTGCAACTTGATCATGTACAGCTCACTGGAGACTATGGATATCTTTCTAAGCATCTTAGATGGATTTGTTGGCAAGGGTTTCCTTCAAAATACATACCTAAAAACTTTGATCTGAAAGGTGTAATTGCGATGGATTTAAAACACAATAATCTTAGAGTAGTCTGGAAAGAAACCCAGGTGTTGGGGTGGTTAAAAATGCTCAATCTTAGTCACTCCAAGTACTTGACAGAAACCCCTGACTTTTCAAAACTACCAAGTCTTGAAAAGCTCATTCTTAAAGATTGTCCAAATTTGTGTAAGCTACACCAATCCATTGGAGATCTCCGCAATCTTCTATTGATAAATTTGAAGGACTGCACAAGCCTAAGAAATCTCCCTAGGGAGGCATATAAGTTGAAATCTTTGAAAACTCTCATCATATCTGGTTGTTCGAAGATTGACAAATTGGAAGAAGATATAGCGCAGATGGAATCCTTGATAACTCTAATCGCAGAAAATACTGCTGTGAAACAAGTGCCCTTTTCAATAGCCATGTCAAAAAGCATTGGTTATATATCTCTTTGTGGATATGAAGGATTATCACGTAATGTTTTTCCTTCTATCATTTTGTCTTGGATATCACCAACGATGAATCCCCTATCTCGCATTCATCCGTTTTGTGGCATATCATCATCTCTAGTTTCCACGGATATGCAGAATAATGATTTGGGTGATCTAGCACCAATTCTTAGTAGCCTTTCAAATCTTCGAACTGTTTTGGTGCAATGTGATACGGTGTTGCAACTGTCTAAACAAGTACAAACAATTGTGGATGATGTATTTGGTGTAAATTTTACAAACTTAGAAACAACATCGTATACATCACAAATTTCAGAGCACTCCTTGAGGTCTTATTTGATTGGAATTGGAACTTTCCAAGAAGTCTTCAACAATCTCAGCAATAGCATATCTGAGGGATTGACAACCAATGAGTCTTATGATGTTTCTTTCCCAGGTAACAATTATCCTTTATGGTTAGCCTATATAGGTGAGGGACATTCAGTATATTTCACTGTGCCCGAGGATTGTCGCATGAAGGGAATGACTTTGTGTGTTGTTTATTTATCAGCCCCTGAAAACACAGCAACTGAATGTCTTACCAGTGTCTTAATGGTTAATTACACAAAATGCACCGTCCAGATATACAAGCGAGACACAGTAATTTCCTTTAATGATTTAGATTGGCAGGGCATAGTATCACAATTGGGAGTTGGAGATGAGGTGGAGATTTTAGTGACTTTTGGGCATGGATTGGTGGTCAAGAAGACAGCTGTCTATCTAATTTGTGATGAATCAATTGAAATGGAAATGGAGCCTTCTTCTGAGCCAGTGAAAGAGCCAAAGAGAAAGCCAAAGAGAAATGCCTTTGTAAGATTCTTGAATAAAATTAGATTTCAATCAATTTTGACTGGCCATGCCAAAGTCATAGCCTTGGATTACCATACTTCTTTCTTGGATAGTGGAGGGAATAACCTATCTTACATAGACATAAAGGAGAAATTCATTAATAAGAACTTCCCTAAATGTGGAAGCCATATGCATCTAGAGTTAATTGTATAA 3351 0.3918 AAGSFNIVVQIYKLRNGVSNCCSACKTRKRITSMSSSNSHWIHDVFLSFRGDTRRVFVSHLDAALSNAGVKTFIDHKLEMGRELGEELVRGIEMSRISIPVLSANYTSSRWCLNELVKIMECRRTYGQLVLPLFYDVDPTHVRHQTGVFGERLEELIQKCSLEGTHDVSWRWKRALKEAANLIGWDATNFRSHGDLVNKIVEEILKRLDNDLMPVPEFVVGLESRVEKVIRCINGQSGRGCVVGIWGMGGSGKTTLAKVIYNEIRLRFTRRSFIETNNRGHIDLQEKLLSDVLNTKVKIHSIAMGITMIDQRLSGERALIVLDDVTEFQQLKALSGNGKWIAAGSVIIITTRDVRLLNLLKVDYVYTMEEMNENDSLELFKWHAFGEEKQRENFNELARNVVAYCGGLPLALEVLGSYLIRRTKKEWQSVLSKLKIIPDDQVQKKLRISFDGLSDHMEKNIFLDVCCFFIGKDRAYATEILNGCGLHADIGITVLIERSLIKVEKNNKLGMHPLLREMGREIICESSRSEPGKRSRLWFHEDVIEVLTKNIGTEIIEGLSLKLHFTSRDCFETYAFGEMKRLRLLQLDHVQLTGDYGYLSKHLRWICWQGFPSKYIPKNFDLKGVIAMDLKHNNLRVVWKETQVLGWLKMLNLSHSKYLTETPDFSKLPSLEKLILKDCPNLCKLHQSIGDLRNLLLINLKDCTSLRNLPREAYKLKSLKTLIISGCSKIDKLEEDIAQMESLITLIAENTAVKQVPFSIAMSKSIGYISLCGYEGLSRNVFPSIILSWISPTMNPLSRIHPFCGISSSLVSTDMQNNDLGDLAPILSSLSNLRTVLVQCDTVLQLSKQVQTIVDDVFGVNFTNLETTSYTSQISEHSLRSYLIGIGTFQEVFNNLSNSISEGLTTNESYDVSFPGNNYPLWLAYIGEGHSVYFTVPEDCRMKGMTLCVVYLSAPENTATECLTSVLMVNYTKCTVQIYKRDTVISFNDLDWQGIVSQLGVGDEVEILVTFGHGLVVKKTAVYLICDESIEMEMEPSSEPVKEPKRKPKRNAFVRFLNKIRFQSILTGHAKVIALDYHTSFLDSGGNNLSYIDIKEKFINKNFPKCGSHMHLELIV 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1945g00004 1116 FunFam Disease resistance protein (TIR-NBS-LRR class) 39 210 - -
Mupr1945g00004 1116 Gene3D - 210 364 IPR027417 -
Mupr1945g00004 1116 SUPERFAMILY Toll/Interleukin receptor TIR domain 35 185 IPR035897 -
Mupr1945g00004 1116 Gene3D - 36 209 IPR035897 -
Mupr1945g00004 1116 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 43 755 IPR044974 GO:0006952
Mupr1945g00004 1116 Gene3D - 370 454 IPR042197 -
Mupr1945g00004 1116 Pfam NB-ARC domain 223 435 IPR002182 GO:0043531
Mupr1945g00004 1116 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 464 IPR027417 -
Mupr1945g00004 1116 PRINTS Disease resistance protein signature 312 326 - -
Mupr1945g00004 1116 PRINTS Disease resistance protein signature 242 257 - -
Mupr1945g00004 1116 PRINTS Disease resistance protein signature 714 730 - -
Mupr1945g00004 1116 PRINTS Disease resistance protein signature 405 419 - -
Mupr1945g00004 1116 SUPERFAMILY L domain-like 561 901 - -
Mupr1945g00004 1116 Pfam TIR domain 43 208 IPR000157 GO:0007165
Mupr1945g00004 1116 SUPERFAMILY "Winged helix" DNA-binding domain 441 547 IPR036390 -
Mupr1945g00004 1116 ProSiteProfiles TIR domain profile. 41 212 IPR000157 GO:0007165
Mupr1945g00004 1116 CDD ABC_ATPase 239 370 - -
Mupr1945g00004 1116 SMART till_3 42 182 IPR000157 GO:0007165
Mupr1945g00004 1116 Gene3D Ribonuclease Inhibitor 559 843 IPR032675 -
Mupr1945g00004 1116 Coils Coil 730 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1945g00004 Mupr-Chr1945 6145 11890 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1945g00004 43 760 WRKY Transcription Factor Family AT4G12020 28.859 4.28e-72 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1945g00004 - - gmx:100815297 1431