Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1937g00005 ATGTCTCCCCCTCATAGCTCTGCTCCCCATAATAACACACCGGATAACGCCACACCGGATAATGCCACGCCCGATAATGCCACGCCGGATAATGCCACGCCCGATAATGCCACACCCGATAATGCCACTCCCGATAATGCCACTCCCGATAATGCCACTCCCGATAATGCCACGCCCGATAATGCCACTCCCGATAACTCCAGAAGCTCCTCCTCTCCTTCGATGGGGAGCAAAGCACCGGCAAAAGATTCAACCAAATCATTGTCACATGAAAATTACTCGGAACCAAACAGCGACAATGGCAGTGGCAGTAGCAATAAAGCAGCACTCGGAGCTGGGATTGGAGTAGGGAAGAAGAAACGAAAGCAGAAGTACTATTATGCAGATCCTTCTCGCGGCGGAAAAGGTGTCAAGTCTTTTACCATTATTTTGAAATTTGGATTCTTTTTCCTTCGGAGTAACTATTACAATAGCGGGCAACAACACCCTCCCCCTAATTGGCAACCAGGTATGGCTCCTAACGGGGGGGACCATGTTGTGAGGGTTCAGCAACAAGGAATGGGAATGGGTATGGGAATGGGAATGGGAATGGGAATGGGTCCTCCTAGTAATGGCTGGGGTGCATCGCATCCTTCAATCAACAGTGGCGATATGAGTTCCAATTACTCCGTTGGAATGGGTTCTACTTCACCAGGCCTTTCTCTCACACTCAAGGGGGGTACCTTCACTTATGAGGAGTTAGCAGCTGCCACCAAAGGATTTGCTAATGAGAACATTACAGGACAAGGTGGCTTTGGTTATGTCCATAAGGGAGTTTTGCCTAATGGAAAGGAAGTCGCTGTTAAGAGTCTCAAAGCAGGTAGCGGCCAAGGAGAACGCGAGTTCCAAGCCGAGATTGACATCATTAGCCGTGTTCATCATCGTCATCTTGTGTCACTTGTTGGATATTGTATTTCTGGTGGACAAAGAATGTTGGTTTATGAATTTGTCCCCAATTCAACTTTAGAACATCACCTTCATGGAAAGGGCATGCCTACCATGGATTGGCCTACTAGAATGAAAATTGCACTTGGATCCGCCAGAGGGCTTGCCTACCTTCACGAAGATTGTAATACTCGGATTTCAATTTCTCCTACATATGATACTTCTCTTTCTATTTTTTCCCTTTCATTATCTTTCTCATATTTGCTTTAA 1194 0.4665 MSPPHSSAPHNNTPDNATPDNATPDNATPDNATPDNATPDNATPDNATPDNATPDNATPDNATPDNSRSSSSPSMGSKAPAKDSTKSLSHENYSEPNSDNGSGSSNKAALGAGIGVGKKKRKQKYYYADPSRGGKGVKSFTIILKFGFFFLRSNYYNSGQQHPPPNWQPGMAPNGGDHVVRVQQQGMGMGMGMGMGMGMGPPSNGWGASHPSINSGDMSSNYSVGMGSTSPGLSLTLKGGTFTYEELAAATKGFANENITGQGGFGYVHKGVLPNGKEVAVKSLKAGSGQGEREFQAEIDIISRVHHRHLVSLVGYCISGGQRMLVYEFVPNSTLEHHLHGKGMPTMDWPTRMKIALGSARGLAYLHEDCNTRISISPTYDTSLSIFSLSLSFSYLL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1937g00005 397 MobiDBLite consensus disorder prediction 1 106 - -
Mupr1937g00005 397 FunFam proline-rich receptor-like protein kinase PERK1 232 329 - -
Mupr1937g00005 397 MobiDBLite consensus disorder prediction 90 106 - -
Mupr1937g00005 397 Gene3D Phosphorylase Kinase; domain 1 228 329 - -
Mupr1937g00005 397 MobiDBLite consensus disorder prediction 1 83 - -
Mupr1937g00005 397 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 215 374 IPR047117 -
Mupr1937g00005 397 Pfam Protein tyrosine and serine/threonine kinase 259 368 IPR001245 GO:0004672|GO:0006468
Mupr1937g00005 397 Gene3D Transferase(Phosphotransferase) domain 1 331 378 - -
Mupr1937g00005 397 ProSiteProfiles Protein kinase domain profile. 254 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1937g00005 397 SUPERFAMILY Protein kinase-like (PK-like) 234 371 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1937g00005 Mupr-Chr1937 23091 24479 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1937g00005 134 374 Trihelix Transcription Factor Family AT1G23540 47.287 1.65e-67 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mupr1937g00005 PK_Tyr_Ser-Thr 4.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1937g00005 - - gmx:100805872 502.671