LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr1934g00006	ATGGGAATCTGCCATGGGAAACCCATTGAGACCCAACAAAGCGGTGGAGAGAGCACGCCAGAATTCCCCAGTGAGGTCCCAACTTGCACAAAGGTCACAAAACCCTCGAAATTCCCATTCTACAGCCCAAGCCCTCTGGCGAGTTGGTTCAAGAACTCGCCGTCGAACTCAAACCCGAGCAGCGTGAGCTCGACGCCGCTGAGGATCTTCAAGCGCCCCTTCCCCCCTCCCTCGCCGGCCAAGCACATCCGCGCGCTGCTGGCTCGCCGCCACGGCTCCGTCAAACCCAACGAGGCCACCATCCCCGAAGGGACCGAGTGCGAGGTTGGTCTCGACAAGACCTTCGCCTTCGCCAAACACTTTTCCGCCCATTACGAGCTCGGCGATGAAGTCGGCCGCGGCCATTTCGGATACACCTGTTCTGCCAAAGCCAAGAAGGGGACACTCAAGGGCATCAACGTTGCCGTCAAAGTCATTCCAAAATCCAAGATGACCACAGCAATTGCTATAGAGGATGTAAGGAGAGAAGTGAAGATATTGCGTGCCCTAACCGGACATAAGAATCTGGTCGAATTCTATGAAGCCTATGAAGATGATGACAATGTTTTTATAGTTATGGAGTTATGCAAAGGAGGGGAATTGCTAGATAGGATTCTTTCCAGGGGTGGAAAGTACTCAGAAGAGGATGCCAGAGTTGTTATGATTCAAATATTAAGTGTGGTAGCTTTTTGTCATCTGCAGGGTGTTGTTCACCGCGATCTCAAGCCAGAGAATTTTCTTTTCACTTCTAAGGATGAAAATTCCACATTGAAGGCTATTGATTTTGGATTGTCTGACTACGTAAAGCCAGATGAGAGGTTGAATGATATTGTGGGAAGTGCTTATTATGTAGCTCCAGAAGTTTTGCATAGATCTTATGGGACAGAAGCAGATATGTGGAGCATTGGTGTAATTGCTTATATTCTTTTATGTGGAAGTCGTCCCTTTTGGGCCCGGACAGAATCTGGTATATTTCGGGCTGTACTGAAGGCAGATCCAAGTTTTGATGAAGCTCCTTGGCCTTCTTTATCTTCCGATGCAAAAGATTTTGTAAAGAGGTTGTTGAATAAGGACTATCGTAAAAGATTGACTGCAGCTCAGGCACTCAGTCATCCATGGCTGGTGAATCATCATGATGATACGAGGATACCTTTGGATATGATAATCCACAAGCTTGTTAAAGCTTACATTTGCTCATCTTCTTTACGCAAATCTGCTTTAGGGGCTCTTGCAAAGACATTAACAGTACCTCAGCTAGCTTATCTCAGAGATCAATTTACTCTGTTAGGGCCAAACAAAAGTGGGTTAATCTCTATGCAGAACTTTAAGACGGCTGTTTTGAGGAGCTCCACTGATGCCTCAAAGGATTCACGGGTCTTAGATTATGTGAACCTGGTTAGTTCTATCCAATATAGGAAATTAGATTTTGAGGAATTTTGTGCTGCGGCTATAAGTGTGCACCAACTTGAGGGCATGGAGAGCTGGGAGCAACATGCAAGGCGTGCCTATGAGCTTTTTGAAAAGGATGGAAATAGACCAATTATGATTGAAGAACTTGCCTCGGAACTTGGGCTTAGTCCATCGGTACCTGTTCATGTAGTACTTCAAGATTGGATAAAACACTCAGATGGGAAGCTTAGTTTCTTGGGGTTTGTCAGGCTTCTGCATGGGGTTTCTTCTCGCGCATTTCAGAAGGCTTGA	1740	0.4638	MGICHGKPIETQQSGGESTPEFPSEVPTCTKVTKPSKFPFYSPSPLASWFKNSPSNSNPSSVSSTPLRIFKRPFPPPSPAKHIRALLARRHGSVKPNEATIPEGTECEVGLDKTFAFAKHFSAHYELGDEVGRGHFGYTCSAKAKKGTLKGINVAVKVIPKSKMTTAIAIEDVRREVKILRALTGHKNLVEFYEAYEDDDNVFIVMELCKGGELLDRILSRGGKYSEEDARVVMIQILSVVAFCHLQGVVHRDLKPENFLFTSKDENSTLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSSDAKDFVKRLLNKDYRKRLTAAQALSHPWLVNHHDDTRIPLDMIIHKLVKAYICSSSLRKSALGALAKTLTVPQLAYLRDQFTLLGPNKSGLISMQNFKTAVLRSSTDASKDSRVLDYVNLVSSIQYRKLDFEEFCAAAISVHQLEGMESWEQHARRAYELFEKDGNRPIMIEELASELGLSPSVPVHVVLQDWIKHSDGKLSFLGFVRLLHGVSSRAFQKA	579

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr1934g00006	579	Gene3D	Phosphorylase Kinase; domain 1	118	214	-	-
	Mupr1934g00006	579	MobiDBLite	consensus disorder prediction	1	28	-	-
	Mupr1934g00006	579	SUPERFAMILY	Protein kinase-like (PK-like)	114	419	IPR011009	-
	Mupr1934g00006	579	ProSiteProfiles	Protein kinase domain profile.	125	387	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr1934g00006	579	FunFam	CDPK-related kinase 3	117	289	-	-
	Mupr1934g00006	579	Pfam	Protein kinase domain	125	387	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr1934g00006	579	MobiDBLite	consensus disorder prediction	11	28	-	-
	Mupr1934g00006	579	CDD	STKc_CAMK	124	386	-	-
	Mupr1934g00006	579	Gene3D	Transferase(Phosphotransferase) domain 1	215	408	-	-
	Mupr1934g00006	579	FunFam	Calcium-dependent protein kinase SK5	297	392	-	-
	Mupr1934g00006	579	ProSitePatterns	Protein kinases ATP-binding region signature.	131	157	IPR017441	GO:0005524
	Mupr1934g00006	579	FunFam	CDPK-related kinase 1	399	571	-	-
	Mupr1934g00006	579	PANTHER	SERINE/THREONINE-PROTEIN KINASE	112	555	-	-
	Mupr1934g00006	579	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	249	261	IPR008271	GO:0004672\|GO:0006468
	Mupr1934g00006	579	SUPERFAMILY	EF-hand	417	570	IPR011992	-
	Mupr1934g00006	579	SMART	serkin_6	125	387	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr1934g00006	579	FunFam	CDPK-related kinase 1	118	213	-	-
	Mupr1934g00006	579	Gene3D	-	409	570	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr1934g00006	Mupr-Chr1934	12938	22063	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr1934g00006	1	577	EF-hand Containing Proteins	AT3G50530	66.404	0.0	844

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CDPK	Mupr1934g00006		Pkinase	1.5e-69	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr1934g00006	K13412		-	gmx:100796678	1058.13