Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr192g00007 ATGCCAGACCCACAAAGTGGCAATGGTAATGGTGATGGTAGTGGTGGTGACGGTAATAATAACACATCTGGAAGCAGACGTAGAAGCACTGCTTCCAGACGTGTCATGATAGCACCGTCATCGTCGCAAGAAGCAATGGTAGGATCTTCACCCACAACACCATGTGGAGCTTGCAAATTCTTGAGGAGGAAGTGTATTGGGGGGTGCATCTTTGCACCCCACTTTGGTACTGACCAGGGTGCAGCCAAGTTTGCGGCCGTGCACAAAGTGTTTGGTGCTAGCAATGTGTCAAAACTCTTATCCAACATTCCGGCAAACCGCCGCCACGAGGCGGCAACAACCATATCGTATGAGGCTCAGGCACGGTTGTCTGATCCGGTTTATGGTTGTGTCTCCACCATCCTTGCTTTGCAACAACAGGTGGCATCTTTGCAAGCAGAGCTGGCAATGTTGCAAAGCCAGCTAATGAACAGTAGGTTTGCCTATGCAAGTGCTCTTCATAGCACACAACAGCTACAGCAGCCAAACATGAATGCAGCAGCACTACAGCCAGCTTACTCCAACAATTCATGTGCTTCCACCAACCTTATGAACTTAGGCAGCTTCAACAATAACCCTGGCTTTGACCTTGCAATGGACACAACACCCTCATCACACACTTTGGAGCCTCTTCAACTCTCAAGGCTGTCCCAATATGAGGAAGAGGATGAAGAGGAAAGCAGGACTCAACAAGCCTTCAATCATCGTCAATGA 753 0.49 MPDPQSGNGNGDGSGGDGNNNTSGSRRRSTASRRVMIAPSSSQEAMVGSSPTTPCGACKFLRRKCIGGCIFAPHFGTDQGAAKFAAVHKVFGASNVSKLLSNIPANRRHEAATTISYEAQARLSDPVYGCVSTILALQQQVASLQAELAMLQSQLMNSRFAYASALHSTQQLQQPNMNAAALQPAYSNNSCASTNLMNLGSFNNNPGFDLAMDTTPSSHTLEPLQLSRLSQYEEEDEEESRTQQAFNHRQ 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr192g00007 250 Pfam Lateral organ boundaries (LOB) domain 54 152 IPR004883 -
Mupr192g00007 250 MobiDBLite consensus disorder prediction 1 50 - -
Mupr192g00007 250 Coils Coil 134 154 - -
Mupr192g00007 250 MobiDBLite consensus disorder prediction 226 250 - -
Mupr192g00007 250 MobiDBLite consensus disorder prediction 229 250 - -
Mupr192g00007 250 PANTHER LOB DOMAIN CONTAINING PROTEIN 52 239 - -
Mupr192g00007 250 ProSiteProfiles LOB domain profile. 53 155 IPR004883 -
Mupr192g00007 250 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr192g00007 Mupr-Chr192 16642 19285 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr192g00007 20 240 AS2 family AT3G03760 57.500 7.70e-77 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr192g00007 LOB 1.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr192g00007 - - gmx:100804332 359.377