Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1925g00004 ATGAGTCGCAAGAGAGATAAGCCCTTCTTTTCCCGCCACGACGCTGCCAAGCGCCGCCGCCCCTTGCCGGAGCCCGTGGAGGAGGATAGACCCACGACGAGGCCGGCGCCGCCGTCCGCGGTGGTTGTAATGGGCCTCCCCCAAGACTGCTCCGTCCTCGATCTCAAGTCCCGTTTCGAGATCTACGGCGCCATCTCCCGCATCCGCATCGACCGCGACGCCGTCGGCTACATCACCTATCGGACCAAGGACTCCGCCGACGCCGCCATCGCCGCCGGCCTCGACCCCTCCTTCGGCGTCACCGTTAACTCCAAAAAGGTGTTGTGGGCAACGGATCCTCTAGCCATGTGGAGGGAAGGAGTTGGTAATAGCAAGGATAAAGGGTCTATGTCAAAGCTTGTGCGTGCTGAGGTACCCTTGAGCAAGCATGGAAGAGGTAATAGACTCGCTTCAACTATAGGGAATACCAAACGCACTCAGGATAACTCAGGTACCTCAGTTTTAGAAGTGCCTTCCAAGGGTAGAGAAATTGTTGTTTATGATGATATCCTCTAA 555 0.5694 MSRKRDKPFFSRHDAAKRRRPLPEPVEEDRPTTRPAPPSAVVVMGLPQDCSVLDLKSRFEIYGAISRIRIDRDAVGYITYRTKDSADAAIAAGLDPSFGVTVNSKKVLWATDPLAMWREGVGNSKDKGSMSKLVRAEVPLSKHGRGNRLASTIGNTKRTQDNSGTSVLEVPSKGREIVVYDDIL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1925g00004 184 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 39 116 IPR000504 GO:0003723
Mupr1925g00004 184 Gene3D - 2 107 IPR012677 -
Mupr1925g00004 184 MobiDBLite consensus disorder prediction 1 38 - -
Mupr1925g00004 184 SUPERFAMILY RNA-binding domain, RBD 25 92 IPR035979 GO:0003676
Mupr1925g00004 184 CDD RRM_SF 41 92 - -
Mupr1925g00004 184 MobiDBLite consensus disorder prediction 7 31 - -
Mupr1925g00004 184 SMART rrm1_1 40 105 IPR000504 GO:0003723
Mupr1925g00004 184 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 41 91 IPR000504 GO:0003723
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1925g00004 1 184 Homeobox Transcription Factor Family AT1G27050 53.171 3.21e-59 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1925g00004 - - ccaj:109806897 328.176