LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr1916g00016	ACAGAGATCACTCGGGTTTTCTCTTCCCATTACGAAGTACAAACATTCTGCAGCAGAAGCATCCACATAACTCGCCACCGTGCCGGCACGATTTCGTGCTTCTTCGTACAAATTCAAAGAATACCAATGGCTCACAGGCGCTGCCTCTTGATAAGAGGGAACCTCATAAATCGGAAATGCCACCCGTCTTTCAGTTATGTTCTCCATAGCAATGAAGACAAACGTGAATGTCCTGATGAAAAGTCATCTTCAGCAGGCATTAGTAATTCTATCCAAAGAAGGATGTTTGGGAACTCAGTTGATGGATCAATGTGGTTTGGTGCCTATTCTGCACATAGATTGCATTCAAACAGATTTCTTTCTCCGTACTCTGGGTATAATTTCTGTCGACATATGTCAACAGTCAATCAGGGTTCTGATAAGATTGACATAATGACTGACATAGCAGATGTTCTCAAAGACACAACTGTGGAAGCTGTAACTTCTCAGGCTCCTATTGTTAAGGAAGTTGCAATTGCTGCTGCTGATTCTGTTTTACCTGTGAAGGCCTTGCAGTACATTATAGATGCTGTGCATTCCTACACTGGATTAAACTGGTGGGCAGCCATAGTTCTAACAACTCTCTTCATTCGGAGTGCAACAGTTCCACTCTTAATAAATCAACTTAAGGCCACTTCTAAGCTTACAATAATGAGGCCGCACATGGAAAAAATAAAGCAAGAGATGGAAGATAAGGCTATGGATCCCGTAGCTGTTGCTGAAGGTCAGAAACAGATGAAGAAGCTATTTAAGGAACATGGTGTCAGTCCATTTACTCCATTGAAGGGACTCTTTATTCAAGGTCCTGTCTTTATTAGCTTTTTCCTTGCGATAAGAACCATGGCTGAAAAGATGCCATCATTCAAGCTAGGGGGAGCCTACTGGTTTGTTGATCTCACAACTCCAGATGCCTTGTACATTTTGCCCGTTCTGACTGCATTGTCATTCTTAATAACAGTAGAGTGCAATATGCAAGAAGGCTTGGAAGGAAATCCTATTGCTGGTACCATGAAAAATGTCTCTAGGGGCCTTGCAGTTCTTACAGTTCCTTTCACCATGGGATTTCCAAAGGCTATATTTTGTTACTGGATTACATCAAATTTGTTTTCACTTGTGTATGGACTTGTCCTTAAAGCACCTGGTGTAAAGAAAGCTTTGGGTCTTCCTAAAATACCCGATGCAGCACCTGCTACCAGTAGTCCACAATCTCCCTTTTCTGTATTTCCAGCACTAAAACAAGCTACATCAGCAACAAATGCACCAAGCTCATTGCCTGTTGAACCATCAAAACATCCAAAGAAAAAGACATCTTCTGTTGTCAGTCAAAGGCTTAGAAGTTTAGAGAAACAAAAAAGAAAA	1398	0.4149	TEITRVFSSHYEVQTFCSRSIHITRHRAGTISCFFVQIQRIPMAHRRCLLIRGNLINRKCHPSFSYVLHSNEDKRECPDEKSSSAGISNSIQRRMFGNSVDGSMWFGAYSAHRLHSNRFLSPYSGYNFCRHMSTVNQGSDKIDIMTDIADVLKDTTVEAVTSQAPIVKEVAIAAADSVLPVKALQYIIDAVHSYTGLNWWAAIVLTTLFIRSATVPLLINQLKATSKLTIMRPHMEKIKQEMEDKAMDPVAVAEGQKQMKKLFKEHGVSPFTPLKGLFIQGPVFISFFLAIRTMAEKMPSFKLGGAYWFVDLTTPDALYILPVLTALSFLITVECNMQEGLEGNPIAGTMKNVSRGLAVLTVPFTMGFPKAIFCYWITSNLFSLVYGLVLKAPGVKKALGLPKIPDAAPATSSPQSPFSVFPALKQATSATNAPSSLPVEPSKHPKKKTSSVVSQRLRSLEKQKRK	466

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr1916g00016	466	PANTHER	OXA1	152	456	IPR001708	GO:0016020\|GO:0032977
	Mupr1916g00016	466	Pfam	60Kd inner membrane protein	199	389	IPR028055	-
	Mupr1916g00016	466	MobiDBLite	consensus disorder prediction	429	466	-	-
	Mupr1916g00016	466	CDD	5TM_Oxa1-like	196	393	-	-
	Mupr1916g00016	466	NCBIfam	membrane protein insertase YidC	198	389	IPR028055	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr1916g00016	Mupr-Chr1916	28274	36335	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr1916g00016	179	397	Chloroplast and Mitochondria Gene Families	AT2G28800	24.444	4.22e-08	53.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr1916g00016	K03217		-	gmx:100787806	764.222