Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1912g00005 TTACAAAAGTCTTCTCCCTTCCCCTTGCAGTTTGCCGGTTTCACTCTCTCTATATACCCATCTTACCTCTCCCATTCAGCTCAATCAATCATTCCTTTTTTTTTTCTCTTCCAAATCACACACACATCCCTCTCTAGAATCTTCTTTTTCCTCTCTGTTTCTGTTTTTCTCTCTTCCATGGCTTCCGATCTCGAAGCGAGAGCCAAAGAGGCCTTCGTTGAAGACCACTTCGAACTCGCCGTGGACCTTCTCACTCAGGCCATTCATCACGAACCCAACAAACCCGAACTCTACGCCGACCGCGCTCAAGCCAACATTAAACTTAAGAACTTCACTGAGGCTGTTGCTGATGCGAATAAAGCAATTGAATTGAATCCTTCTCTATCAAAAGCATATTTGCGGAAAGGTACTGCATGCATGGAACTTGAGGAATACCAGACTGCAAAGGCTGCTCTGGAGACGGGTGCTTCATTGGCTCCAGACAATTCAAGATTTGCTAATTTGATCAATGAATGTGATAAGCTCATAGCAGAAGAATCTTATACCATACCTATACAGGAAAAGACCACAACAGAGGATGTTACTCCAAAAGATGTTCAGCAACAGGTTGATCTTCCAGAGAAGCCGACAGTGGCAGTGACTAAACCTAAATATAGGCATGAATTCTACCAGACACCTGATCAGGTTGTTGTAACCATATTTGCAAAGAAAGTTCCAAAGGAAAGCATTACTGTTGACTTCGGTGAACAAATACTTAGTGTTGGTATTACTGTCCCTGGAGAAGATGCTTATGTTTTTCAACCTCGCTTATTTGGAAAGATCATACCTTCCAGATGCCGGTATGAAGTTTTGTCCACCAAAATTGAAATTCGCCTTGTGAAAGCAGAACCTCTTCAATGGACATCACTAGAATTCACCAAAGAAATTACAGTTGCACGGAGTGTTAATACTTCTTCAGTTACTGGAAGCCAAAGACCTTCTTACCCGTCCTCAAAACAAACAAGAGATTGGGACAAGATTGAAGCTCAGGTCAAGAAAGAGGAGAAAGACGAAAAACTTGATGGCGATGCTGCTTTGAACAAATTTTTCCGGGAAATATATCAAGATGCAGATGAGGATACAAGAAGAGCCATGAAAAAGTCATTTGTGGAGTCTAATGGGACAGTGCTGTCTACAAACTGGAAAGAAGTGGGATCAAAGAAGGTAGAGGGAAGTCCTCCTGATGGCATGGAGTTGAGGAAATGGGAATATTAA 1254 0.4219 LQKSSPFPLQFAGFTLSIYPSYLSHSAQSIIPFFFLFQITHTSLSRIFFFLSVSVFLSSMASDLEARAKEAFVEDHFELAVDLLTQAIHHEPNKPELYADRAQANIKLKNFTEAVADANKAIELNPSLSKAYLRKGTACMELEEYQTAKAALETGASLAPDNSRFANLINECDKLIAEESYTIPIQEKTTTEDVTPKDVQQQVDLPEKPTVAVTKPKYRHEFYQTPDQVVVTIFAKKVPKESITVDFGEQILSVGITVPGEDAYVFQPRLFGKIIPSRCRYEVLSTKIEIRLVKAEPLQWTSLEFTKEITVARSVNTSSVTGSQRPSYPSSKQTRDWDKIEAQVKKEEKDEKLDGDAALNKFFREIYQDADEDTRRAMKKSFVESNGTVLSTNWKEVGSKKVEGSPPDGMELRKWEY 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1912g00005 417 FunFam Protein SGT1 homolog A 213 318 - -
Mupr1912g00005 417 Coils Coil 101 121 - -
Mupr1912g00005 417 ProSiteProfiles SGS domain profile. 327 417 IPR007699 -
Mupr1912g00005 417 SUPERFAMILY HSP20-like chaperones 207 311 IPR008978 -
Mupr1912g00005 417 ProSiteProfiles TPR repeat profile. 129 162 IPR019734 GO:0005515
Mupr1912g00005 417 SUPERFAMILY TPR-like 61 172 IPR011990 GO:0005515
Mupr1912g00005 417 Gene3D Tetratricopeptide repeat domain 58 209 IPR011990 GO:0005515
Mupr1912g00005 417 Pfam Tetratricopeptide repeat 96 127 IPR019734 GO:0005515
Mupr1912g00005 417 Pfam Tetratricopeptide repeat 130 162 IPR019734 GO:0005515
Mupr1912g00005 417 SMART tpr_5 61 94 IPR019734 GO:0005515
Mupr1912g00005 417 SMART tpr_5 129 162 IPR019734 GO:0005515
Mupr1912g00005 417 SMART tpr_5 95 128 IPR019734 GO:0005515
Mupr1912g00005 417 Pfam SGS domain 335 415 IPR007699 -
Mupr1912g00005 417 MobiDBLite consensus disorder prediction 316 337 - -
Mupr1912g00005 417 ProSiteProfiles CS domain profile. 215 304 IPR007052 -
Mupr1912g00005 417 CDD p23_CS_SGT1_like 221 304 - -
Mupr1912g00005 417 Pfam CS domain 219 294 IPR007052 -
Mupr1912g00005 417 Gene3D - 216 307 IPR008978 -
Mupr1912g00005 417 ProSiteProfiles TPR repeat profile. 95 128 IPR019734 GO:0005515
Mupr1912g00005 417 FunFam Protein SGT1 homolog 60 195 - -
Mupr1912g00005 417 PANTHER PROTEIN SGT1 HOMOLOG 60 415 IPR044563 GO:0051087
Mupr1912g00005 417 MobiDBLite consensus disorder prediction 316 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1912g00005 Mupr-Chr1912 47671 55133 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1912g00005 53 159 U-box Gene Family AT3G07370 29.907 3.23e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1912g00005 K12795 - gmx:100780174 629.017