Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1905g00009 ATGAACAACAATAATTGGGTGTTGGATTATGATTATCTAGACAACATTCCCCTCCCCACCCTTGACACACCCAATTTCTCTTGGTCCTCCTCTCCTCCTCCCACACTCAGTGTGGAGCTAGATGACTCATTTGGAAATTCGGATGGTTTCAAGGAAAACGGGTCGAGAAAACGGTTTATGGAACTGGGGTCTCTCTTGGACCCTCGAAGGCCTCTTAAATTGGACAAGGTTGTCTTATTAAGTGATGCAGTTCGAATGCTGTCTCACTTACGAGAGGAAACTCACAAGCTCAGAGAGTCCACTCAGAATCTACAGCAAAAAATCAATGAATTGAAGGCTGAGAAAAATGAGCTTCGTGATGAGAAGCAGCGACTAAAAGCAGAGAAAGATAACCTTGAGCAGAAGCTTAAAGCCTTCCTTCCTGCGTTTCCTGCACAGGGACAAGTTCTTGCCAACAAGCTCGTGCCCTTCATGGGCTACCCAGGAGTTGCCACGTGGCAGTTTTTACCACCTGCTGCGGTTGATACCTCACAGGACCAT 540 0.4667 MNNNNWVLDYDYLDNIPLPTLDTPNFSWSSSPPPTLSVELDDSFGNSDGFKENGSRKRFMELGSLLDPRRPLKLDKVVLLSDAVRMLSHLREETHKLRESTQNLQQKINELKAEKNELRDEKQRLKAEKDNLEQKLKAFLPAFPAQGQVLANKLVPFMGYPGVATWQFLPPAAVDTSQDH 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1905g00009 180 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 56 118 IPR036638 GO:0046983
Mupr1905g00009 180 PANTHER BHLH TRANSCRIPTION FACTOR 58 180 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Mupr1905g00009 180 Coils Coil 87 138 - -
Mupr1905g00009 180 Gene3D - 79 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1905g00009 Mupr-Chr1905 56516 59820 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1905g00009 3 180 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 46.637 5.45e-57 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1905g00009 - - ccaj:109814067 299.671