Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1903g00001 ATGGCGATCTCGGAGAACGTGCCACCGGTGCTGCAGGTTGTTTTGTTTCTGGGTGTGGACTATGGAGTGAGTGCATTAGCAACATCATGGTGGAGGAGGATGTTGGGGGAATGCTTATGCAATGGCTTGAAGCAAATTGAGGGTAGTGGCTTTGAGCTAGGGGAAAAACAAAAGAAGGTAAAGCTTGATGATATGAAGCTTTCAACATCAGGGTTGGGGCAGCAGGGACATGAAGGAGGGGAGAAGAAGTGTCTGAATTCTGAGCTATGGCATGCATGCGCGGGGCCCTTGGTGTCCCTACCAACTGCAGGGACTCGTGTGGTTTACTTCCCTCAGGGTCATAGTGAGCAGGTTTCTGCCACAACTAACAGAGAAATTGATGGACACATTCCCAATTATCCTAGCTTGCCACCCCAGTTGATTTGTCAACTTCACAATGTCACAATGCATGCAGATGTTGAAACGGATGAAGTATATGCTCAAATGACATTGCAGCCATTGACTCCGCAAGAGCAGAAGGATACATTTCTTCCTATGGAATTGGGCATTCCAAGTAAGCAGCCGTCAAATTATTTTTGCAAGACATTAACGGCCAGTGACACCAGTACACATGGGGGGTTCTCTGTTCCTCGTCGTGCAGCTGAGAAAGTTTTCCCTCCACTGGATTTCTCGCAGCAACCACCAGCACAGGAGCTAATCGCTAGAGATCTCCATGATGTTGAATGGAAATTTCGACATATTTTTCGGGGACAGCCAAAACGACACCTTCTTACTACAGGCTGGAGTATATTTGTTAGTGCCAAGAGACTTGTGGCTGGAGATTCCGTGCTTTTCATATGGAATGAGAAGAATCAGCTTCTTTTGGGAATACGTCGAGCCAATCGACCCCAAACTGTAATGCCATCATCAGTTCTATCTAGTGATAGCATGCACATTGGACTTCTTGCAGCTGCTGCCCATGCTGCAGCAACTAATAGCTGTTTTACTGTGTTCTATAATCCAAGGGCTAGTCCATCTGAGTTCGTCATACCACTTTCAAAATATATCAAAGCTGTGTACCATACACGCATTTCTGTTGGTATGCGTTTCAGGATGCTTTTTGAGACTGAAGAGTCAAGTGTCCGCAGGTATATGGGTACAATAACTGGCATAACTGATTTGGATTCTGTTCGGTGGCCGAATTCTCATTGGCGCTCTGTCAAGGTTGGTTGGGATGAATCAACAGCTGGAGAGAGACAACCGCGAGTGTCTTTGTGGGAAATTGAGCCATTAACAACATTCCCAATGTATCCATCATTATTTCCCCTCAGATTGAAACGACCATGGCATCCTGGCACCTCATCTTTGCATGATGGGAGAGATGAAGCAACAAATGGACTAATGTGGCTGAGAGGTGGGTCTGTAGACCAAGGCCTCAATACCCTAAATTATCAAGGAGCTGGTATGTTGCCCTGGATGCAGCAGAGACTGGATCCAACTTTACTAGGAAATGATCAGAATCAACAGTACCAAGCCATGTTGGCAGCTGGTTTGCAGAACCTAGGCAGTGGGTATCTCATGAAGCAACAAATGATGAATTTTCAACAGCCTTTTCACTGTCTTCAACAATCAGGAAACAATAATTCTCCTCTGCAACTTCAGCATCAGCAAGCAATTCAACAATCGGTGTCTTCTAACATGCTGCAGCCACAAGCCCATGTAATGACAGAGAATCTCTCTCAGCACCTCCTTCAGAAGCCGCACAACAATCAAGAAGTCCAAGCACAACAGCAGCCACATACTTATCAAGACGCACTTTTAATTCCAAGTGATCAGCTCCATCAGAGACAACACTCCGGCGTTCCTTCACCATCATATTCAAAACCAGATTTCTTGGATTCGAGCATGAAGTTCCCTGCTTCGGTTCCCCCCGGACAAAACATGCTTAGTTCACTTTGTCCTGAAGGAAGCGGCAGTCTCTTGAATTTATCAAGAAGCGGTCAGTCCTTGCTGACCGAACAGTTACTGCCCCAACAACAATGGACTCAAAAGTATGCACCTGTCCAGGTCAATGCCTATGGAAGCTCTATGTCACATGCACAATATCCTGGAAAAGATTCTGCAATGGTGCTACCACATTGTAATTCAGATGCACAAAATCCTACACTCTTTGGTGTCAATATTGATTCATCTGGCCTTCTCCTCCCCACCACCGTCCCTGGTTACACCACCTCGTCCGCCGACACCAATTCGTCAACAATGCCTTTAGGCGAGTCTGGCTTCCAGGGTTCTCTATATGGCTGCATGCAAGATTCAGCGGAGTTGTTGCGTAGTGCAGGGCATGTTGATCCACAAAACCAGACTCAAACCTTTGTCAAGGTTTACAAATCAGGGTCAGTTGGTCGCTCACTTGATATATCCCGGTTCAGCAGCTATCATGAACTGCGCGAGGAGTTGGCTCAGATGTTTGGAATTGAGGGAAAGTTAGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTTGTCGACAGGGAGAATGATGTTCTTCTCCTTGGCGACGATCCATGGGAATCATTCGTCAATAATGTTTGGTATATCAAAATACTTTCACCTGAAGACATTCAGAAAATGGGGGAACAAGCAGTAGAATCCCTTGCTCTAAGTTCTGGACAAAGGCTAAATGGCACTGGTGCTGAGTCTCAGGACATCGTTTCAGGACCACCATCAATTGGCTCACTCGAGGTTGAGTAA 2730 0.4615 MAISENVPPVLQVVLFLGVDYGVSALATSWWRRMLGECLCNGLKQIEGSGFELGEKQKKVKLDDMKLSTSGLGQQGHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREIDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGITDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGTSSLHDGRDEATNGLMWLRGGSVDQGLNTLNYQGAGMLPWMQQRLDPTLLGNDQNQQYQAMLAAGLQNLGSGYLMKQQMMNFQQPFHCLQQSGNNNSPLQLQHQQAIQQSVSSNMLQPQAHVMTENLSQHLLQKPHNNQEVQAQQQPHTYQDALLIPSDQLHQRQHSGVPSPSYSKPDFLDSSMKFPASVPPGQNMLSSLCPEGSGSLLNLSRSGQSLLTEQLLPQQQWTQKYAPVQVNAYGSSMSHAQYPGKDSAMVLPHCNSDAQNPTLFGVNIDSSGLLLPTTVPGYTTSSADTNSSTMPLGESGFQGSLYGCMQDSAELLRSAGHVDPQNQTQTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIQKMGEQAVESLALSSGQRLNGTGAESQDIVSGPPSIGSLEVE 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1903g00001 909 MobiDBLite consensus disorder prediction 886 900 - -
Mupr1903g00001 909 Pfam B3 DNA binding domain 192 293 IPR003340 GO:0003677
Mupr1903g00001 909 SUPERFAMILY CAD & PB1 domains 777 856 - -
Mupr1903g00001 909 Gene3D - 778 871 - -
Mupr1903g00001 909 Gene3D - 190 293 IPR015300 -
Mupr1903g00001 909 Gene3D - 356 428 - -
Mupr1903g00001 909 SUPERFAMILY DNA-binding pseudobarrel domain 176 321 IPR015300 -
Mupr1903g00001 909 ProSiteProfiles PB1 domain profile. 782 866 IPR000270 GO:0005515
Mupr1903g00001 909 Pfam Auxin response factor 318 401 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mupr1903g00001 909 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 81 871 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mupr1903g00001 909 FunFam Auxin response factor 777 871 - -
Mupr1903g00001 909 CDD B3_DNA 191 292 IPR003340 GO:0003677
Mupr1903g00001 909 SMART B3_2 192 294 IPR003340 GO:0003677
Mupr1903g00001 909 ProSiteProfiles B3 DNA-binding domain profile. 192 294 IPR003340 GO:0003677
Mupr1903g00001 909 Pfam AUX/IAA family 779 866 IPR033389 -
Mupr1903g00001 909 FunFam Auxin response factor 356 428 - -
Mupr1903g00001 909 MobiDBLite consensus disorder prediction 886 909 - -
Mupr1903g00001 909 FunFam Auxin response factor 190 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1903g00001 Mupr-Chr1903 8780 17151 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1903g00001 162 874 B3 DNA Binding Superfamily AT5G37020 68.465 0.0 931
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mupr1903g00001 AUX_IAA 1e-07 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1903g00001 - - gmx:100784373 1618.21