Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1890g00001 ATGGTGCTGCTCAGATGTTTCTCAGTGACACTTTTGCAGTGGTGTCTCTTGGCTTGCTTACTTTGCTTGTCACTGGGGCTTAATAATCAAGCCCCATCCTGTGACCCTCATGATTTATCAGCTCTGAAGGAGTTTGCAGGCAAGCTTACAAGTGGTTCTATCATCACAGCATGGTCCAATGACACTGTATGCTGCAACTGGCTTGGAGTTGTTTGTGATAATGTAACTGGTGGTGGTGGAACAGTTGCTAGTAGGGTGACCAAGTTGATCCTGCCTGAAATGGGTCTCAGTGGAACAATTTTACCCTCTTTGGCACAGCTAGATCAGCTCATTGTGCTGAATCTTTCATTCAATAACCTCAAGGGTGAATTGCCTGAAGAGTTCTCTCAGTTGAAGCAGTTGAAGTTCCTTGATGTGAGCCATAATATGCTGTCTGGACCTGTTGCTGGAGTTCTCTCTGGTTTGCAATCCATTCAAGTGTTGAATATCTCTAGCAATTCACTTTCTGGAGTTCTCTTCCCTTTTGGGGAATTCCCACATCTCCTTGCTCTCAACATGAGTAACAATTCATTCACTGGCAGATTCAACCCACAAATTTGCAGCTCTTCCAAGGATCTTCACACCCTTGATTTATCTGCAAATCATTTTGTTGGTGATCTTGAAGGCTTGGACAACTGCACTACATCTCTCCGACAGTTGCATTTGGATTCCAATTCATTTTCTGGCCCTCTTCCAGATTCCTTGTATTCAATGTCAGCCTTGGAGGAACTCTCAGTCTCTGCCAACAATTTATCTGGCCAGTTAAGCAAGCAATTAAGTAAGCTCTCTAATCTAAAAGCTCTGGTGGTTTCTCGGAACAGGTTTTCTGGGGAACTTCCAAACGTGTTTGGGAATCTTTTGCAGCTAGAAGAATTAGAAACACGTGCCAATTCATTTTCTGGACCCTTGCCTTCCACCTTGGCTTTTTGCTCTAAGCTTAGGGTGCTTAATCTTCGAAATAATTCCTTGTCAGGGCCTATTGATCTTAATTTCACTGGCTTGTCTAATCTTCAAACACTTGATCTTGCTACTAATCATTTCATTGGACCCCTTCCAACTTCCCTGTCCTATTGCCACGAATTGAAAGTTCTAAACCTTGCTAGGAATGGTTTAACTGGTTCTATCCCTGAAAACTATACCAACCTCACTTCACTTTTGTTTATATCCTTGTCAAACAACAGTAATGAGAACTTATCTGGGGCGCTGTCTGTTCTGCAGCAGTGCAAAAATCTCACCACCCTTATCCTCACTAAGAATTTCCATGGTGAGGAAATTTCAGAAAGTGCGATGGTAGGATTCGAGAGCCTTATGATTTTAGCACTTGGAAATTGTGGTCTTAAAGGCCGTATTCCTTCTTGGTTATCAAATTGCACGAAGTTGGCAGTCCTTGATTTGTCTTGGAACCATTTGAATGGTAGTATTCCTTCTTGGATTGGTGAGATGGACAGTTTGTTCTACTTGGATTTCTCAAATAATTCTCTTGCCGGAGAAATACCAAAAAGTTTGACAGAGTTGAAGGGCCTCATGTGCCAAAACTGTAGTAGAGCAAATCTTGCTGCTTTTGCATTCATTCCTCTCTTTGTTAAGAGAAACACAAGTGCAAGTGGGCTGCAATACAACCAGGCCTCAAGTTTCCCTCCTTCAATTTACTTGAGCAATAACATATTAAGTGGAAATATATGGCCTGAAATTGGTCAATTGAAAGCACTGCATGTCTTAGATTTAAGCAGGAACAACATCACTGGTATCATTCCTAGCACTATTTCAGAGATGGCGAACTTGGAATCATTAGATTTATCTTATAATAATCTCTCTGGAGAAATTCCTCCATCATTTAACAACCTCACATTCCTGTCAAAGTTCAGTGTGGCATATAATCGCTTAGACGGACCAATTCCAACTGGAGGGCAGTTTTTAAGCTTCCCTAGTTCAAGCTTTGAGGGCAACCTAGGGCTTTGTAGGGAAATTGATTCTCCTTGCAAAGTTGTCAACAATACGAGGCCCATCATCTCTTCTGGTTCTTCCAGAAAACTGGATAGAAGCAATGTCCTTGGCATAACAATCAGTATAGGGATAGGGCTTGCACTGCTTCTTGCAATTATTCTGCTAAGAATGTCAAAGAGGGATGGGGATAAGTCTATCGATAACTTTGATGAGGAGCTAAATATCAGGCCACACAGGTTATCTGAAGCACTTGTTTCCTCCAAGTTGGTGCTTTTTCAGAATTCAGATTGCAAGGATCTTACAGTTGCAGATTTGTTAAAATCCACAAACAATTTCAACCAGGCAAATATTATTGGTTGTGGTGGGTTTGGTCTTGTCTACAAGGCATATCTTCCAAATGGCACTAAAGCAGCTATCAAGAGACTCTCAGGGGACTGTGGTCAAATGGAACGTGAATTCCAAGCTGAAGTAGAGGCTCTCTCAAGAGCTCAACACAAGAACCTTGTTTCTCTGAAAGGATATTGCCGGCACGGCAATGACAGATTGCTAATATACTCGTACTTGGAGAATGGAAGCTTGGATTATTGGCTACATGAGTGTGTGGATGAAAATTCAGCTCTAAAATGGGACACAAGACTCAAGATTGCACAAGGCGCTGCTCGGGGATTAGCTTACCTGCATAAAGGGTGTGAACCATACATAGTGCATCGAGATGTTAAATCTAGCAACATACTTTTGGATGACAAGTTTGAAGCTCATTTGGCCGATTTTGGCCTCTCAAGGCTACTTCAACCATATGATACTCATGTCACAACTGACTTGGTAGGAACTTTAGGATATATTCCTCCAGAGTATAGTCAGACACTGACAGCAACCTTCAGGGGTGATGTTTATAGTTTCGGTGTGGTTCTTCTTGAGCTTCTTACTGGTAGAAGGCCAGTAGAAGTCATCAAGGGGAAAAATTGCAGAAATCTGGTGTTTTGGGTGTTTCAGATGAAATCTGAGAACAAGGAGCAGGAAATTTTTGATCCAGCAATTTGGCAGAAGGATAATGAGAAACAGCTATTGGAGGTGCTTGCCATTGCTTGTAAATGTCTAGACCAAGATCCTAGGCAAAGACCCTCTATTGAAGTAGTTGTTTCATGGCTTGATAGTGTAAGATTTGATGGTTCTCAACAAATCACCCAAACATTAATGAGAGCTAAGAGAGCAAAGATAGAACTCCACGTAGTCGAAATAGCAACTGAGTGGACTAAATTGGGGTCCTCCTAA 3255 0.4184 MVLLRCFSVTLLQWCLLACLLCLSLGLNNQAPSCDPHDLSALKEFAGKLTSGSIITAWSNDTVCCNWLGVVCDNVTGGGGTVASRVTKLILPEMGLSGTILPSLAQLDQLIVLNLSFNNLKGELPEEFSQLKQLKFLDVSHNMLSGPVAGVLSGLQSIQVLNISSNSLSGVLFPFGEFPHLLALNMSNNSFTGRFNPQICSSSKDLHTLDLSANHFVGDLEGLDNCTTSLRQLHLDSNSFSGPLPDSLYSMSALEELSVSANNLSGQLSKQLSKLSNLKALVVSRNRFSGELPNVFGNLLQLEELETRANSFSGPLPSTLAFCSKLRVLNLRNNSLSGPIDLNFTGLSNLQTLDLATNHFIGPLPTSLSYCHELKVLNLARNGLTGSIPENYTNLTSLLFISLSNNSNENLSGALSVLQQCKNLTTLILTKNFHGEEISESAMVGFESLMILALGNCGLKGRIPSWLSNCTKLAVLDLSWNHLNGSIPSWIGEMDSLFYLDFSNNSLAGEIPKSLTELKGLMCQNCSRANLAAFAFIPLFVKRNTSASGLQYNQASSFPPSIYLSNNILSGNIWPEIGQLKALHVLDLSRNNITGIIPSTISEMANLESLDLSYNNLSGEIPPSFNNLTFLSKFSVAYNRLDGPIPTGGQFLSFPSSSFEGNLGLCREIDSPCKVVNNTRPIISSGSSRKLDRSNVLGITISIGIGLALLLAIILLRMSKRDGDKSIDNFDEELNIRPHRLSEALVSSKLVLFQNSDCKDLTVADLLKSTNNFNQANIIGCGGFGLVYKAYLPNGTKAAIKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLKGYCRHGNDRLLIYSYLENGSLDYWLHECVDENSALKWDTRLKIAQGAARGLAYLHKGCEPYIVHRDVKSSNILLDDKFEAHLADFGLSRLLQPYDTHVTTDLVGTLGYIPPEYSQTLTATFRGDVYSFGVVLLELLTGRRPVEVIKGKNCRNLVFWVFQMKSENKEQEIFDPAIWQKDNEKQLLEVLAIACKCLDQDPRQRPSIEVVVSWLDSVRFDGSQQITQTLMRAKRAKIELHVVEIATEWTKLGSS 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1890g00001 1084 ProSiteProfiles Leucine-rich repeat profile. 606 628 IPR001611 GO:0005515
Mupr1890g00001 1084 FunFam Leucine-rich repeat receptor-like kinase 37 157 - -
Mupr1890g00001 1084 Gene3D Ribonuclease Inhibitor 33 225 IPR032675 -
Mupr1890g00001 1084 Pfam Protein kinase domain 774 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1890g00001 1084 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 410 1044 - -
Mupr1890g00001 1084 SMART serkin_6 773 1044 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1890g00001 1084 FunFam Phytosulfokine receptor 1 736 848 - -
Mupr1890g00001 1084 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Mupr1890g00001 1084 Gene3D Ribonuclease Inhibitor 372 680 IPR032675 -
Mupr1890g00001 1084 SUPERFAMILY Protein kinase-like (PK-like) 755 1044 IPR011009 -
Mupr1890g00001 1084 Pfam Leucine rich repeat 104 144 IPR001611 GO:0005515
Mupr1890g00001 1084 Pfam Leucine rich repeat 582 641 IPR001611 GO:0005515
Mupr1890g00001 1084 Pfam Leucine rich repeat 448 507 IPR001611 GO:0005515
Mupr1890g00001 1084 FunFam Leucine-rich repeat receptor-like protein kinase 849 1055 - -
Mupr1890g00001 1084 FunFam Tyrosine-sulfated glycopeptide receptor 1 344 678 - -
Mupr1890g00001 1084 PRINTS Leucine-rich repeat signature 604 617 - -
Mupr1890g00001 1084 PRINTS Leucine-rich repeat signature 583 596 - -
Mupr1890g00001 1084 ProSiteProfiles Protein kinase domain profile. 773 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1890g00001 1084 Gene3D Transferase(Phosphotransferase) domain 1 849 1068 - -
Mupr1890g00001 1084 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 245 340 - -
Mupr1890g00001 1084 SUPERFAMILY RNI-like 228 527 - -
Mupr1890g00001 1084 Gene3D Ribonuclease Inhibitor 301 371 IPR032675 -
Mupr1890g00001 1084 Gene3D Ribonuclease Inhibitor 226 300 IPR032675 -
Mupr1890g00001 1084 ProSitePatterns Serine/Threonine protein kinases active-site signature. 895 907 IPR008271 GO:0004672|GO:0006468
Mupr1890g00001 1084 CDD STKc_IRAK 779 1045 - -
Mupr1890g00001 1084 Pfam Leucine Rich Repeat 325 344 IPR001611 GO:0005515
Mupr1890g00001 1084 ProSitePatterns Protein kinases ATP-binding region signature. 779 801 IPR017441 GO:0005524
Mupr1890g00001 1084 SMART LRR_typ_2 107 130 IPR003591 -
Mupr1890g00001 1084 SMART LRR_typ_2 604 627 IPR003591 -
Mupr1890g00001 1084 SMART LRR_typ_2 275 298 IPR003591 -
Mupr1890g00001 1084 SMART LRR_typ_2 580 603 IPR003591 -
Mupr1890g00001 1084 SMART LRR_typ_2 131 154 IPR003591 -
Mupr1890g00001 1084 SMART LRR_typ_2 347 371 IPR003591 -
Mupr1890g00001 1084 SMART LRR_typ_2 470 494 IPR003591 -
Mupr1890g00001 1084 SUPERFAMILY L domain-like 550 679 - -
Mupr1890g00001 1084 Gene3D Phosphorylase Kinase; domain 1 737 848 - -
Mupr1890g00001 1084 SUPERFAMILY L domain-like 34 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1890g00001 Mupr-Chr1890 2517 8487 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1890g00001 257 648 Receptor kinase-like Gene Family AT1G55610 29.712 3.26e-27 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mupr1890g00001 Pkinase 6.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1890g00001 - - gmx:100797812 1796.17