Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1889g00010 ATGCTGACTCTGATTCCCACCGCCACATTCATCTTCTTCTTCTTGTCGTCGCCTCCGTGCGCCCCTTTTGTTCACTCTCATTTCGCGGGATTCGAGAGCCTGAAAGTTTCTCCTTCTAAATTCATTGGCTCTGTGAGAACAGTCAGTAACATTTTGCAAAACGTTACCTCTAGGCTCAAGCTTGAAAGTTTCTCCTTCAGCAATGTAAATAATGACTTTGGTCTTTTTGACGCCTTCTCCACGTGTCTCGATTTGTTAGACTTGTCAGCTGAGGAGCTCAGCTGGTGCATTTCGGCTGTTCTAAGTCCCCAGGGGAAGCATAACGGTACTGGGAATCTGAGCTCTGATTTGAGGACATGGCTGAGCGCTGTACTGGCGAATACAGATACATGCATGGATAATTTTGAAGGTAGCAATGAGAACGTGAGGGATTTAATATTCACTGGAATTGACCAAGCAAAGTCATTGCTCCAAAATATTCTCACACAAGTGAAGCCTGTTAATTTGGATAATTTAAGTAGAAGTAGAAGTAGAAGTAGAAGTAGTATTCCTTCATGGATTGAACCAGGGGACAAGAAGCTGCTACAGAAAAATATGGTGCATGCGGATGCTGTAGTTGCTGCTGATGGGACTGCCGATTTTACTACGGTGATGGATGCTGTACACGCAGCACCAGACCGTAGCATGAAACGGTATGTGATATACATAAAGAAGGGTGTTTACGCCGAGAAAGTTGAGATCAGTAAGAAGAAATGGAATCTCGTGATGATTGGAGACGGTACGGATGCCACTGTTATAACCGGTAACCTGAGTCGTAATAAAAGTATGAGCTCATTCAAAACCGCTACCTTTGGTGTGAATGGCAGAGGATTCATAGCACGAGACATTGCTTTCAGAAACACTGCAGGGCCCGGAAGACATCAAGCTGTTGCGCTAAGATCAAACTCTGACCTTTCTGTGTTCTACCGATGTGGGATTTATGGCTACCAGGACAGCCTCTATGCCCACTCCTTGCGCCAATTCTACAGAGATTGCAAAATTAGTGGTACTGTGGATTTCATATTTGGTCATGCCAATGCAGTGTTCCAAAACTGCACAATACTGGTCAAGAAAGGCTTACCAAAGCAGAAAAACACAATCACAGCTCAAGGGGAAATCGACCCAATCCGATCATCTGGTTTCTCCATCCAATTCTGCAACATTTCAGCAAATTATGACCTTCTACCCTATGTTAACACCACCTCAACGTACCTTGGCAGACCGTGGAAGCCATATTCTAAAACAATTTTCATGCAATCCTACATCAGTGACGTGTTAAGGCCAGAAGGGTGGTTAGAGTGGAATGGGTCATTGTATTTAGACACGTTGTTCTATGCTGAGTACAAAAATTATGGACCAGGAGCTAGGCTAAATAACAGAGTCAAATGGCCAGGGTACCATGTGATAAATGATTCTAGAAAAGCTTTAAACTTCACTGTGGCCAATATGATTACAGGGAATCTTTGGTTACCTTCAACCGGTGTAAGGTTCACTCCTGGATTAGGAAATTGA 1551 0.4371 MLTLIPTATFIFFFLSSPPCAPFVHSHFAGFESLKVSPSKFIGSVRTVSNILQNVTSRLKLESFSFSNVNNDFGLFDAFSTCLDLLDLSAEELSWCISAVLSPQGKHNGTGNLSSDLRTWLSAVLANTDTCMDNFEGSNENVRDLIFTGIDQAKSLLQNILTQVKPVNLDNLSRSRSRSRSSIPSWIEPGDKKLLQKNMVHADAVVAADGTADFTTVMDAVHAAPDRSMKRYVIYIKKGVYAEKVEISKKKWNLVMIGDGTDATVITGNLSRNKSMSSFKTATFGVNGRGFIARDIAFRNTAGPGRHQAVALRSNSDLSVFYRCGIYGYQDSLYAHSLRQFYRDCKISGTVDFIFGHANAVFQNCTILVKKGLPKQKNTITAQGEIDPIRSSGFSIQFCNISANYDLLPYVNTTSTYLGRPWKPYSKTIFMQSYISDVLRPEGWLEWNGSLYLDTLFYAEYKNYGPGARLNNRVKWPGYHVINDSRKALNFTVANMITGNLWLPSTGVRFTPGLGN 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1889g00010 516 Gene3D - 197 514 IPR012334 -
Mupr1889g00010 516 SUPERFAMILY Pectin lyase-like 200 513 IPR011050 -
Mupr1889g00010 516 ProSitePatterns Pectinesterase signature 2. 347 356 IPR033131 -
Mupr1889g00010 516 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 48 161 IPR035513 -
Mupr1889g00010 516 Pfam Pectinesterase 203 500 IPR000070 GO:0030599|GO:0042545
Mupr1889g00010 516 Pfam Plant invertase/pectin methylesterase inhibitor 46 143 IPR006501 GO:0004857
Mupr1889g00010 516 FunFam Pectinesterase 197 514 - -
Mupr1889g00010 516 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 167 IPR035513 -
Mupr1889g00010 516 SMART PMEI_2 37 163 IPR006501 GO:0004857
Mupr1889g00010 516 PANTHER PECTINESTERASE 55 504 - -
Mupr1889g00010 516 CDD PMEI-like_4 5 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1889g00010 Mupr-Chr1889 35209 37245 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1889g00010 10 514 Carbohydrate Esterase AT3G43270 54.951 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1889g00010 K01051 - gmx:100798620 714.531