Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1889g00001 ATGGCTCCGTTATCGACAAAAAAGCTGACTCTGATTCCCACCGCTACATTCATCTTCTTGTTGTTGTTATCGTCTCCGTGCGCCCCGTTTGTTCACTCTGATTTCGCGGGACTCGAGAGCCTGAAAGTTTCTCCTTCTGAATTCATTGGCTCCGTGAGAAAAGTAGGTAACGTTTTGCAAAAGGTTATCTCCAGTCTCAAGTCTGAAAGTTTCTCCTTTGGCAATGACAATAATTACTTTGGTCTTTGTGACGCCATTTCCACGTGTCTCGATTTGTTAGACTTGGTAGCCGATGACCTCAGCTGGTCCATTTCCGCTGTTCAAAGTCCCCAAGGGAAGCATAACAGTACTGGGAATCTGAGCTCTGATTTGAGGACATGGCTGAGCGCTGCACTTGCAAATGCAGATACATGCATGGATGGTTTTGAAGGTAGCAATGGGAACGTGAGGGGTTTAATATCCACTGGAATTGACCAAGCTAAGTCTTTGCTCCAAAAGATTCTCACCCAGGTGAAGCCTGTTAATTTGGATAAATGCAGTAGAAGTAGAAGTAGAAATAGTATTCCTTCATGGATTGAACCAGGGGACAAGAAGCTGCTGCAGACAAAAGAGGTGGGTGTGGATGCTGTAGTTGCTGCTGATGGGACTGCCAATTTTACTACAGTGATGGATGCTGTGCACGCAGCACCTATGTACAGCATGAAACGGTATGTGATATACATAAAGAAGGGTGTTTACACCGAGAAAGTTGAGATCAATAAGAATAAGTGGAATCTCGTGATGATTGGAGACGGTATGGATGACACTGTTATAACTGGTAACCTGAGTTACACGACAAATTTGACCACATTCAAGACAGCTACCTTTGGTGTGAATGGCAGAGGATTCATAGCACGAGACATTTCCTTCAGGAACACTGCAGGGCCCAAAAGAAAGCAAGCTGTTGCGCTAAGATCAAACTCTGACCTCTCTGTGTTCTACCGATGTGGGATTTATGGCTACCAAGACAGCCTCTATGCCCACTCCTTGCGCCAATTCTATAGAGATTGCAAAATTAGTGGTACTGTGGATTTCATATTTGGTCATGCCAATGCAGTGTTCCAAAACTGCACAATACTGGTCAAGAAAGGCTTACCAAAGCAGAAAAACACAATCACAGCTCAAGGGGAAATCGACCCAACCCGATCATCTGGTTTCTCCATCCAATTCTGCAACATTTCAGCAGATTATGACCTTCTACCCTATGTTAACACCACCTCAACGTACCTTGGCAGACCGTGGAAGCCATATTCTAGAACAATTTTCATGCAATCCAATATCAGTGGCGTGTTAAGTCCAGAAGGGTGGTTAGAGTGGAATGGGTCATTGTATTTGGACACGTTGTACTATGCTGAGTACAATAATTATGGACCAGGAGCTAGGCTAGAAAACAGAGTCAAATGGCCAGGGTATCATGTGATAAATGATTCTAGCAAAGCTTTTAACTTCACTGTGGCAAATATGATTTTGGGGGATCTTTGGTTACCTTCAACCGGTGTAAGGTTCACTCCTGGATTTGGCAATTGA 1566 0.4406 MAPLSTKKLTLIPTATFIFLLLLSSPCAPFVHSDFAGLESLKVSPSEFIGSVRKVGNVLQKVISSLKSESFSFGNDNNYFGLCDAISTCLDLLDLVADDLSWSISAVQSPQGKHNSTGNLSSDLRTWLSAALANADTCMDGFEGSNGNVRGLISTGIDQAKSLLQKILTQVKPVNLDKCSRSRSRNSIPSWIEPGDKKLLQTKEVGVDAVVAADGTANFTTVMDAVHAAPMYSMKRYVIYIKKGVYTEKVEINKNKWNLVMIGDGMDDTVITGNLSYTTNLTTFKTATFGVNGRGFIARDISFRNTAGPKRKQAVALRSNSDLSVFYRCGIYGYQDSLYAHSLRQFYRDCKISGTVDFIFGHANAVFQNCTILVKKGLPKQKNTITAQGEIDPTRSSGFSIQFCNISADYDLLPYVNTTSTYLGRPWKPYSRTIFMQSNISGVLSPEGWLEWNGSLYLDTLYYAEYNNYGPGARLENRVKWPGYHVINDSSKAFNFTVANMILGDLWLPSTGVRFTPGFGN 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1889g00001 521 PANTHER PECTINESTERASE 69 509 - -
Mupr1889g00001 521 SUPERFAMILY Pectin lyase-like 207 518 IPR011050 -
Mupr1889g00001 521 ProSitePatterns Pectinesterase signature 2. 352 361 IPR033131 -
Mupr1889g00001 521 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 173 IPR035513 -
Mupr1889g00001 521 Pfam Pectinesterase 208 505 IPR000070 GO:0030599|GO:0042545
Mupr1889g00001 521 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 63 164 IPR035513 -
Mupr1889g00001 521 CDD PMEI-like_4 16 175 - -
Mupr1889g00001 521 SMART PMEI_2 18 170 IPR006501 GO:0004857
Mupr1889g00001 521 Pfam Plant invertase/pectin methylesterase inhibitor 60 151 IPR006501 GO:0004857
Mupr1889g00001 521 Gene3D - 202 519 IPR012334 -
Mupr1889g00001 521 FunFam Pectinesterase 202 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1889g00001 Mupr-Chr1889 8594 10659 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1889g00001 17 519 Carbohydrate Esterase AT3G43270 55.491 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1889g00001 K01051 - gmx:100798620 755.362