Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1884g00006 ATGGACGACGGCGATCCTTCCCTGTCGGATAAAGAGGAGGAGAACGATGACGAAGACGTGGCGGATATTCTGTCGCGAATTCGACTCGTCGATGCTCCCATACTCTTGTTCGTTTGTTTCCATAAGGCTCTGCGCTCCGAACTCGATCACCTTCGTCGCTTGGCGGAAACGGCGTCGTTGGAGGACGAGCCACGCCGTTGCCGACAAATAATCCTTCAACTTCAACGTAGATTCCAGTTTGTGAAACTAGCTCATAAGTATCATTGTGCTGCGGAAGACGAGGTTATCTTCCTTGCACTGGATACACATGTGAAAAACATCGTATGTACATATTCCCTTGAACATAACAGTACCAATGACCTTTTTGATTCTATCTTTCACTTCTTGGATGAGCTGATGGTTCCTAAAGAGAATATTTCCAAGCTGTTCCAAGAACTTGTGTACTGCATTGGTATCTTGCAAACCTCCATCTACCAACATATGCTGAAAGAAGAAGAGCAGGTTTTTCCTCTGTTGATGCAGAAACTATCTACTGAAGAACAGGCCTCACTTGTGTGGCAATTCATATGCAGTGTTCCTATAATGTTGCTGGAGGAAATTTTGCCATGGATGGTATCCTTCCTTTCTGCAAACAAACAATCAGAAGTTACCCAATGTTTAAAAGAAATTGCACCGATGGAAAAAGCATTGCAAGAGGTTTTGATTTCTTGGCTTAGATGCAACAAACAAACCTTCACCGGGACCTGTTTTCAGAGTGAAGAATTTCAAGGTGCTGATGGATTCCTACATATAGAAAGATCACTTGGGCTGAGTTATTGTAATAGGAACTCTGAAGAAATTTCAAGTTGGACGAAAATGAATGGCCAAGAAATAGAAGATGGGGCCAACCAGGTTAATGTCCTTCATCTTTGGCATAATGCCATCAAGAAAGATTTGAAAGAAATTCTGAAAGAACTTTATCTACTAAGAAAATCTGGATGTTTTCAGAATTTAGACTCAATACTTATCCAACTAAAATTCTTTGCTGATGTCCTCATCTTCTACAGCAATGCTCAGAAGAAATTCTTTCATCCTGTACTGAATAAACATGCTTATGACTGGTTGTCCAAGTCTATTGAACAATTTCTTGGTGAAAGTAACATTGAAGATATACAACAGTTGCTATTATATAACTCAGAAAGTGGAATGCCTTTGAGCAAATTCATAGAGAAGCTTTGCCAAAAACTTGAATCATTTGTATCAGGAGTCAACAAACAATTTGCTTTTCAAGAAAATGAGGTATTTCCTATCATTAGAAAGAACTGCAGAAATGGAATGCAAGAGAGACTTCTAAACTTGAGCCTGCATATGATGCCTCTTGGGTTACTAAAGTGTGTTATAACTTGGTTTTCAGTTCACCTATCTGAAAAAGAGTCCAGGTCCATTCTCTATTGCATAAAGAAAGGAAACAACTCTGTCTGTAAAGCTTTTTCATCACTGATGCACGAGTGGTTCCGCATTGGTTATTCAGGTAAAACCTCTATTGAAAAATTCAGACAAGACTTGCAACATATGTTTAAAAGAAGATGCTCTTCTTTACCTGAACAATTGAAGGAAGCTCGTGGGTTTTCTTTCTTAAATTCTGAGAAGCAGCCTCACAAAGTCTCTGGCCAGAATTGTTTGTCCTATTCCTCCTCTTCTGGATCCAGTAATATAAACAAGTATGAGACACCATACTCTACAGGAATTAATTTGCATATATTTTTTCCTGCCACAGTTGTGAAGTTGCATCAGCACCCTGCATTACACGCAGCAAAATGCTCTTCTATTTCCTTTCTTGATAATCCGAAACCAATTGACGTAGTATTTTTCTTTCACAAGGCTATCAAGAAAGATTTGGAGTATTTGGTTCTTGGCTCAGCTCAGTTAGAAGAAAATGATAAGTTGCTGATGGATTTCAAAAAACGATTCCATCTCATATATTTTCTTCATCAAATCCATAGTGATGCAGAGGATGAGATAGTTTTTCCAGCCTTGGAGGCAAGGGGTAAACTCAAAAACATTAGCCATGCCTATACCTTTGATCACAAACATGTAGTTGAGCACTTCAATAAAATATCTCGAATCCTTGATAAGATGACTGGATTACATCTTTCAGTTTCTACAATTGATTCAAATATAAGGGAGAAGGGAATGCTGAGGTATCACCATTTATGCAGGAAGCTGCAAGAAAAGTGCAAATCAATGCATAAGTTACTTTCTGATCATATAAACCGTGAGGAAATAGAAATTTGGCCTATAATTAGAGAATTGTTCTCAAATGAGGAGCAAGGGAAGATCATAGGATGCATGCTTGGAAGAATAAGGGCAGAAATATTACAAGATATGATACCTTGGCTAATGGCATCTTTAACACAGGAAGAACAACATATTTTAATGATCTTATGGTCCATGGCTACTAAAAATACAATGTTTGATGAATGGTTAGGTGAATGGTGGGATGGGTACAGTTTAACTAAGGTAACAGAGGGATCAAATGATGCCCCTCTACAGCCTGTTGAGCCACTGGAGATTATATCCAAATATTTATCTGAAGAAATTCTAAATGAATTACAAGAAGAATCATCTGCCAACAAAAGCATAAATTTTTTGCAGAAGGATCATATTGGTAATAATGTTGAGCTGTCTAACTGCAACTTTGATGATGAAGTTAAGGTTCATAATGCAGAACAAAACAATAATCGAAGTTCAAAACACACAAATCAATTTCATGATAATAACAAACATGCTTGCAATGAAGTAACAGATACCACAAATCTGGTAAACAATGATGGTAAGTCTTCTCAACTTTGTGACAAGTCTGGGCATTATGACCGACTTTTGAAATTGAGTCAAGATGATTTGGAGATGGCGATAAGAAGGGTGTCTCGTGACTCTTGCTTAGATCCTCAGAAGAAGTCATACATAATACAGAACCTACTAATGAGTCGTTGGATAATTAGACAGCAGATCTCTTCTACAGAAATCAATATAAAAAATGGTGAACTGGAATTTCCTGGGAAGCATCCATCTTACAGGGATCATCTTAAACTAATCCACGGCTGTAAACACTACAAGAGGAACTGTAAGCTTTTTGCTCCATGTTGCAACCAACTTCACACCTGCATACATTGCCATAATGAGGAATCAGATCATTCAGTTGACAGAAAGTCTATTACAAAGATGATGTGTATGAAGTGCTTGATGATTCAACCAATCAGTGCCACATGCTCAACAGTTTCTTGTAATTTACCCATGGCAAAATATTACTGCAGGATCTGCAAATTATTTGACGATGAAAGGGAAATTTACCACTGTCCTTATTGTAATCTGTGCCGAGTTGGAAAGGGTTTGGGTGTAGACTACTTTCACTGCATGAGTTGCAATGCTTGTATGTCTCGTTCTCTTATGATACATACATGCAGGGAGAAACATTTAGAGGATAACTGTCCAATTTGTCATGAATATATCTTCACATCCTGCTCTCCGGTAAAAGCCCTCCCATGTGGTCACGTGATGCACTCAACATGTTTTCAGGAATATACCTGCTTTAATTATACCTGCCCAATATGTAGCAAATCACTTGGAGACATGCAGATGTTAGATGCGTTAATGACTGAAGAGAAAATTTCTGATGAGATTTTGGGTCAAACTCAGAGCTGCAGGTTATATTATGTAATGACTGTGAAAAGAAAGGAGCGGCTCCCTTCCACTGGCTCTACCACAAATGCTCTAGTTGTGGTTCCTACAACACTAGAGTTCTATGATCCTTCCGTTGAGAGCATAAAGTTGCTTCTCCCTTGCTTTGCAAGTCGCTGA 3837 0.3849 MDDGDPSLSDKEEENDDEDVADILSRIRLVDAPILLFVCFHKALRSELDHLRRLAETASLEDEPRRCRQIILQLQRRFQFVKLAHKYHCAAEDEVIFLALDTHVKNIVCTYSLEHNSTNDLFDSIFHFLDELMVPKENISKLFQELVYCIGILQTSIYQHMLKEEEQVFPLLMQKLSTEEQASLVWQFICSVPIMLLEEILPWMVSFLSANKQSEVTQCLKEIAPMEKALQEVLISWLRCNKQTFTGTCFQSEEFQGADGFLHIERSLGLSYCNRNSEEISSWTKMNGQEIEDGANQVNVLHLWHNAIKKDLKEILKELYLLRKSGCFQNLDSILIQLKFFADVLIFYSNAQKKFFHPVLNKHAYDWLSKSIEQFLGESNIEDIQQLLLYNSESGMPLSKFIEKLCQKLESFVSGVNKQFAFQENEVFPIIRKNCRNGMQERLLNLSLHMMPLGLLKCVITWFSVHLSEKESRSILYCIKKGNNSVCKAFSSLMHEWFRIGYSGKTSIEKFRQDLQHMFKRRCSSLPEQLKEARGFSFLNSEKQPHKVSGQNCLSYSSSSGSSNINKYETPYSTGINLHIFFPATVVKLHQHPALHAAKCSSISFLDNPKPIDVVFFFHKAIKKDLEYLVLGSAQLEENDKLLMDFKKRFHLIYFLHQIHSDAEDEIVFPALEARGKLKNISHAYTFDHKHVVEHFNKISRILDKMTGLHLSVSTIDSNIREKGMLRYHHLCRKLQEKCKSMHKLLSDHINREEIEIWPIIRELFSNEEQGKIIGCMLGRIRAEILQDMIPWLMASLTQEEQHILMILWSMATKNTMFDEWLGEWWDGYSLTKVTEGSNDAPLQPVEPLEIISKYLSEEILNELQEESSANKSINFLQKDHIGNNVELSNCNFDDEVKVHNAEQNNNRSSKHTNQFHDNNKHACNEVTDTTNLVNNDGKSSQLCDKSGHYDRLLKLSQDDLEMAIRRVSRDSCLDPQKKSYIIQNLLMSRWIIRQQISSTEINIKNGELEFPGKHPSYRDHLKLIHGCKHYKRNCKLFAPCCNQLHTCIHCHNEESDHSVDRKSITKMMCMKCLMIQPISATCSTVSCNLPMAKYYCRICKLFDDEREIYHCPYCNLCRVGKGLGVDYFHCMSCNACMSRSLMIHTCREKHLEDNCPICHEYIFTSCSPVKALPCGHVMHSTCFQEYTCFNYTCPICSKSLGDMQMLDALMTEEKISDEILGQTQSCRLYYVMTVKRKERLPSTGSTTNALVVVPTTLEFYDPSVESIKLLLPCFASR 1278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1884g00006 1278 SUPERFAMILY Zinc hairpin stack 1093 1147 IPR037275 -
Mupr1884g00006 1278 Coils Coil 41 61 - -
Mupr1884g00006 1278 SUPERFAMILY CHY zinc finger-like 1020 1085 IPR037274 GO:0008270
Mupr1884g00006 1278 SUPERFAMILY RING/U-box 1143 1202 - -
Mupr1884g00006 1278 ProSiteProfiles Zinc finger CTCHY-type profile. 1092 1155 IPR017921 -
Mupr1884g00006 1278 Pfam Ring finger domain 1154 1197 IPR001841 -
Mupr1884g00006 1278 CDD Hr-like 613 759 - -
Mupr1884g00006 1278 ProSiteProfiles Zinc finger RING-type profile. 1156 1198 IPR001841 -
Mupr1884g00006 1278 Gene3D nmb1532 protein domain like 607 779 - -
Mupr1884g00006 1278 Gene3D nmb1532 protein domain like 32 190 - -
Mupr1884g00006 1278 Gene3D nmb1532 protein domain like 293 446 - -
Mupr1884g00006 1278 CDD Hr-like 40 170 - -
Mupr1884g00006 1278 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1149 1200 IPR013083 -
Mupr1884g00006 1278 Pfam CHY zinc finger 1028 1102 IPR008913 GO:0008270
Mupr1884g00006 1278 ProSiteProfiles Zinc finger CHY-type profile. 1021 1090 IPR008913 GO:0008270
Mupr1884g00006 1278 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 656 1225 - -
Mupr1884g00006 1278 SMART ring_2 1156 1197 IPR001841 -
Mupr1884g00006 1278 Pfam Hemerythrin HHE cation binding domain 41 172 IPR012312 -
Mupr1884g00006 1278 CDD RING-H2_Pirh2-like 1155 1198 - -
Mupr1884g00006 1278 FunFam Zinc finger protein-related isoform 1 1151 1200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1884g00006 Mupr-Chr1884 52797 65359 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1884g00006 32 854 C2H2 Transcription Factor Family AT3G18290 32.587 9.77e-130 429