Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1882g00003 ATGTCTGGTAGGTGTGCAGCTTGCAAGAATCAAAGAAGAAGATGCCCTTCAGATTGCATTTTCTCTCCATATTTCCCTGCCAACGATCCTCAAAGATTTACTTGTGTTCACAGAATATATGGTGGCAGCAATGTTGGAAAAATGCTTCAGCAAATTCCACCATATTTACGTGAAGAAGCTGCAAATACTTTATATTTTGAAGCACAATCTAGGATTCAAGATCCTGTTTATGGATGTGTTGGAATTATCTCTAAATTATATCAACAAATCCACGAAACAGAAATTGCACTCACCCAAATCCAAACTCAGATTGCATGCCACAGGCTTCAAGACCCACAAGTAAAACCTGAATCAAACTTTGATGTCTTGCCACCACAAAGCACCAGCACATCATCGGAGTCTCAATTGCCAAGTCAATTTCCTTGGTTTAATTAA 435 0.3885 MSGRCAACKNQRRRCPSDCIFSPYFPANDPQRFTCVHRIYGGSNVGKMLQQIPPYLREEAANTLYFEAQSRIQDPVYGCVGIISKLYQQIHETEIALTQIQTQIACHRLQDPQVKPESNFDVLPPQSTSTSSESQLPSQFPWFN 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1882g00003 144 MobiDBLite consensus disorder prediction 117 144 - -
Mupr1882g00003 144 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 125 - -
Mupr1882g00003 144 ProSiteProfiles LOB domain profile. 3 104 IPR004883 -
Mupr1882g00003 144 MobiDBLite consensus disorder prediction 120 144 - -
Mupr1882g00003 144 Pfam Lateral organ boundaries (LOB) domain 4 100 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1882g00003 Mupr-Chr1882 15519 16141 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1882g00003 4 105 AS2 family AT3G26660 63.725 1.72e-45 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr1882g00003 LOB 2.7e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1882g00003 - - gmx:100790640 233.032