Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1878g00005 ATGATGGAGGGAGAGGAGAATATTCAAGCATCATCAAAGGGAAAAAATGTTGAAAACTTCACCTGCTTGGAGGCACCAAGGAAGAAAAACAAGAAGATAGAGAACAAGAGGAGGTTTAGTGATGAACAGATAAGATCACTAGAATGCATATTTGAGTCAGAGTCAAAGCTTGAGCCAAGGAAGAAGATGCAACTGGCAAGAGATCTTGGCCTGCAGCCTCGCCAAGTTGCCATATGGTTCCAAAACAGAAGGGCAAGGTGGAAATCAAAACGCATAGAGCAAGAGTACAGGAAACTCAAAGATGAATATGACAATTTAGCATCAAGGTTTGAGTCTCTAAAGAAAGAGAAGGAGTCTTTGCAATTAGAGTTTCAGAAGCTAAGTGATTTGGTGGTGACATCTCAATCTCATGATGGTGGAAGGGAAGACAAGGGTGGCAAAGAAAACAGCATAGAAGATGGTGGTTCAGGCAGCGGATACAGCAGTTGGAAGCCTGAAGCAAAACCAAGGTTTTCAAATGAGGGGTTGGAGGAGAGAATAGGGGTGTGTTCAGATGATCAAAATGAGAATAGCATCATAAGGAGTGAGAAATCTGAGGACAAAGAACACCAACAAATTCTCAGAATGGATGATGATCATGCAGAGATGCCATTGGCATCACTTGAAAAATGGTACAGTAGTGTGGACCCTAGTGGCATCTTGGACCAGTCATGTAGCAGTTCTCAATGTTCATAG 735 0.4245 MMEGEENIQASSKGKNVENFTCLEAPRKKNKKIENKRRFSDEQIRSLECIFESESKLEPRKKMQLARDLGLQPRQVAIWFQNRRARWKSKRIEQEYRKLKDEYDNLASRFESLKKEKESLQLEFQKLSDLVVTSQSHDGGREDKGGKENSIEDGGSGSGYSSWKPEAKPRFSNEGLEERIGVCSDDQNENSIIRSEKSEDKEHQQILRMDDDHAEMPLASLEKWYSSVDPSGILDQSCSSSQCS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1878g00005 244 ProSiteProfiles 'Homeobox' domain profile. 30 90 IPR001356 GO:0003677
Mupr1878g00005 244 Coils Coil 82 130 - -
Mupr1878g00005 244 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 28 199 IPR045224 GO:0003700
Mupr1878g00005 244 MobiDBLite consensus disorder prediction 170 214 - -
Mupr1878g00005 244 PRINTS Lambda-repressor HTH signature 61 70 IPR000047 GO:0003677
Mupr1878g00005 244 PRINTS Lambda-repressor HTH signature 70 86 IPR000047 GO:0003677
Mupr1878g00005 244 SUPERFAMILY Homeodomain-like 26 90 IPR009057 -
Mupr1878g00005 244 Gene3D - 25 99 - -
Mupr1878g00005 244 MobiDBLite consensus disorder prediction 136 150 - -
Mupr1878g00005 244 FunFam Homeobox-leucine zipper protein ATHB-7 17 90 - -
Mupr1878g00005 244 MobiDBLite consensus disorder prediction 133 214 - -
Mupr1878g00005 244 Pfam Homeodomain 36 88 IPR001356 GO:0003677
Mupr1878g00005 244 Pfam Homeobox associated leucine zipper 90 130 IPR003106 GO:0006355|GO:0043565
Mupr1878g00005 244 SMART HOX_1 33 94 IPR001356 GO:0003677
Mupr1878g00005 244 CDD homeodomain 36 91 IPR001356 GO:0003677
Mupr1878g00005 244 ProSitePatterns 'Homeobox' domain signature. 65 88 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1878g00005 Mupr-Chr1878 70114 72216 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1878g00005 1 120 Homeobox Transcription Factor Family AT2G46680 62.500 7.73e-44 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr1878g00005 Homeodomain 2.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1878g00005 K09338 - gmx:100793260 414.846