Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1878g00004 ATGGGGATTCTTAGCGATCATCATAATCAGAAACATCATCACCACCACCACATGAGCTTTCACTTTCACTTTCACTTTCATCACCACCACGAGAAAAAGGATCTGAAGGACATCCCAAAAGGGTGTCTAGCGATCTTGGTAGGTCAAGGGGAGGAACAACAGAGGTTCGTCATTCCTGTTATGTACATGAACCACCCACTCTTCATGCAGTTACTCAAACAAGCTGAAGAGGAATTCGGCTTCGATCAGAAAGGTCCCATTACCATACCCTGCCACGTGGAGCACTTTCGCACCGTTCAAGGCATCATCCATAGGGAGAAATGTCTCCACCACAATCATGCTTCCTGCTTTAAATTGTTTGATTAG 366 0.4536 MGILSDHHNQKHHHHHHMSFHFHFHFHHHHEKKDLKDIPKGCLAILVGQGEEQQRFVIPVMYMNHPLFMQLLKQAEEEFGFDQKGPITIPCHVEHFRTVQGIIHREKCLHHNHASCFKLFD 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1878g00004 121 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 98 IPR003676 GO:0009733
Mupr1878g00004 121 Pfam Auxin responsive protein 32 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1878g00004 Mupr-Chr1878 38121 38682 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1878g00004 37 112 Calmodulin-binding Proteins AT5G20810 51.316 2.44e-20 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1878g00004 K14488 - gmx:100526867 170.244