Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1878g00003 ATGGGGCATTGCTGCAGCAAAAACATCGCCGTCAACAACGAGACGGTGGCCGCCGATCACGGCCCCAAGCCGCCGCATTATGCGCCGGCATCGCCGCCGCCGCCCTCCGGGAGCTCGATGTCCGGCGCGACTCCGGGGAGGAACACGCCGGCGCACTCGTTCTCGGCGAGTCCTTTCCCGAGCCCTCTCCCGCCGGGCGTGGCGCCGTCGCCGGCCAAGACGCCGGGGAGGAAGTTCCGGTGGCCGCTTCCTCCTCCGTCGCCGGCGAAGCCGATCATGACGGCGCTGCTGCGGCGGCAGGGGAAGACGAAGCCGAAGGAGGGCCCTATACCGGAGGAGCAAGGGGAGGGCGGAGAGGGCGAGAGGTCCCTCGATAAGAGCTTCGGTTATGGAAAGAATTTTGGGGCCAAGTTCGAATTGGGGAAGGAAGTGGGTCGAGGGCATTTTGGTCACACTTGTTGGGCCAAAGGGAAGAAGGGTGACCTTAAGGGTCAATCCGTCGCTGTGAAAATTATTTCCAAAGCTAAGTGGTTACATCACCTTGTTGCCAAAGCACAAGAATGGAGCAGACAGTTTGTGCAAGATTTTGTTGTCAAAATGACTTCAGCAATAGCAATCGAAGATGTAAGGAGGGAGGTGAAAATGTTGAAGGCCTTATCTGGACATAAGAATTTGGTCAAGTTTTATGATGCATTTGAGGATGTCAACAACGTCTACATTGTTATGGAGTTGTGTGAGGGTGGAGAATTACTTGACAGAATTCTTGATAGAGGTGGAAGATACCCAGAGGATGATGCTAAAGCTATTCTTGTACAAATTCTAGATGTAGTTGCATTTTGTCATCTTCAAGGGGTTGTTCATCGTGATCTAAAACCAGAGAATTTTCTTTTTGTCTCAAAAGACGAGGATGCTGTGATGAAAGTTATTGATTTTGGGCTATCTGATTTTGTTAGGCCAGCACTGACTTCTAATAAACATGCAGAGCAACGCCTCAATGATATTGTTGGCAGTGCCTACTACGTTGCACCTGAAGTGCTCCATAGATCTTACAGTGTTGAAGGAGACTTATGGAGTATTGGAGTGATATCATACATATTGTTATGCGGAAGTAGACCATTTTGGGCACGCACTGAATCAGGAATTTTCCGGTCTGTGTTAAGAGCGAATCCTAACTTTGATGATTCACCTTGGCCATCAATATCACCAGAAGCTAAAGACTTTGTGAAGAGACTTCTTAACAAGGATCACAGGAAAAGGATGACTGCTGCTCAAGCTTTAGTAAAGTCATACGTGCGTGCGTCACCTTTGAGACGTGCAGCATTGAAGGCTCTTGCGAAAGCATTGACAGAAGACGAGCTAATCTACCTTAGAGCACAGTTTAACCTCTTGGAGCCTAAAGATGGCTGCATTTCACTTGATAATTTTAGAGTTGCTCTCACGAAAAATGCAACTGATGCCATGAAGGAATCAAGGGTCCCTGAAATTTTAAATTTGATGGAGCCACTCTCCTACAAAAAAATGGACTTCGAAGAGTTTTGCGCTGCTGCAATCAGTGTATACCAGCTGGAAGTTCATCAAGAATGGGAGAGAATTGCTACCAAAGCTTTTGAGTATTTTGAGGAGACAGGAAACCGAGTCATTTCAGTTGAGGAGTTGGCTCAGGAGATGAATTTGGGTCCATCAGCTTACTCTTTAATGGGTGATTGGATCAGAAAATCTGATGGAAAACTCAGCTTTGTCGGATATACAAAGTTTTTGCATGGTGTCACAATGCGTAGTTCAAATACAAGACACCGACAGCTAGTATAA 1809 0.4754 MGHCCSKNIAVNNETVAADHGPKPPHYAPASPPPPSGSSMSGATPGRNTPAHSFSASPFPSPLPPGVAPSPAKTPGRKFRWPLPPPSPAKPIMTALLRRQGKTKPKEGPIPEEQGEGGEGERSLDKSFGYGKNFGAKFELGKEVGRGHFGHTCWAKGKKGDLKGQSVAVKIISKAKWLHHLVAKAQEWSRQFVQDFVVKMTSAIAIEDVRREVKMLKALSGHKNLVKFYDAFEDVNNVYIVMELCEGGELLDRILDRGGRYPEDDAKAILVQILDVVAFCHLQGVVHRDLKPENFLFVSKDEDAVMKVIDFGLSDFVRPALTSNKHAEQRLNDIVGSAYYVAPEVLHRSYSVEGDLWSIGVISYILLCGSRPFWARTESGIFRSVLRANPNFDDSPWPSISPEAKDFVKRLLNKDHRKRMTAAQALVKSYVRASPLRRAALKALAKALTEDELIYLRAQFNLLEPKDGCISLDNFRVALTKNATDAMKESRVPEILNLMEPLSYKKMDFEEFCAAAISVYQLEVHQEWERIATKAFEYFEETGNRVISVEELAQEMNLGPSAYSLMGDWIRKSDGKLSFVGYTKFLHGVTMRSSNTRHRQLV 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1878g00003 602 Gene3D Phosphorylase Kinase; domain 1 132 249 - -
Mupr1878g00003 602 ProSiteProfiles Protein kinase domain profile. 138 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1878g00003 602 SMART serkin_6 138 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1878g00003 602 CDD STKc_CAMK 137 426 - -
Mupr1878g00003 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Mupr1878g00003 602 MobiDBLite consensus disorder prediction 100 125 - -
Mupr1878g00003 602 SUPERFAMILY EF-hand 442 588 IPR011992 -
Mupr1878g00003 602 SUPERFAMILY Protein kinase-like (PK-like) 130 435 IPR011009 -
Mupr1878g00003 602 MobiDBLite consensus disorder prediction 57 71 - -
Mupr1878g00003 602 MobiDBLite consensus disorder prediction 25 39 - -
Mupr1878g00003 602 Pfam Protein kinase domain 139 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1878g00003 602 MobiDBLite consensus disorder prediction 15 125 - -
Mupr1878g00003 602 PANTHER SERINE/THREONINE-PROTEIN KINASE 122 573 - -
Mupr1878g00003 602 Gene3D Transferase(Phosphotransferase) domain 1 250 429 - -
Mupr1878g00003 602 FunFam CDPK-related kinase 3 130 326 - -
Mupr1878g00003 602 FunFam CDPK-related kinase 1 201 249 - -
Mupr1878g00003 602 FunFam Calcium-dependent protein kinase SK5 341 435 - -
Mupr1878g00003 602 Gene3D - 449 517 - -
Mupr1878g00003 602 ProSitePatterns Protein kinases ATP-binding region signature. 144 170 IPR017441 GO:0005524
Mupr1878g00003 602 Gene3D - 430 580 - -
Mupr1878g00003 602 FunFam CDPK-related kinase 1 445 517 - -
Mupr1878g00003 602 MobiDBLite consensus disorder prediction 40 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1878g00003 Mupr-Chr1878 28440 35217 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1878g00003 1 593 EF-hand Containing Proteins AT3G50530 54.490 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mupr1878g00003 Pkinase 1.5e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1878g00003 K13412 - gmx:100803631 969.918