Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1872g00005 GATATTGCTAATATGAAGGACTCTTGGTTTTTTGACAATAATTTCAATGGTCTGTCGGATGAGATTTTTGATGATGTAGTCAATTTTTTTGATTTCCCGCTGGAAGATGTGGACGCTAATGTTGTGGAAGAGGACTTGGATGCTCAATTTAAATGCCTTGAAGACCCACGTTTTGATGTTTTTTCAGCATCATCAGCTGGGCTGTGTGGCAAAGCTCAAAATGAAAAACCCCAACTTGGGATGGGGTTCTCTGCTTCTGTGAGTATTCTGTCCACAGTTATGTGTAATGGGATTTCCCCAATAAAACAGCTGGCAATGGCTCCTGGACCAACATATGGAATTGGAAAAACCATTCCTAACCAGAATGCCTCTTTCAATGGAAAAGATTTGCATCAATTCCAAATGTACAGTCCAGTTTCGGTTTTTGAAAGCAGCAGTTCTTCCTCAGCCGAGAATTCCAACGTTGATCGACCTCCCATCCCAGTAAAGCGTGCCCGAGGCAAACGACAGCGTCTTTCAAGCTTCAGTCCTCTGTTTTCAAGTCCTTTCATCCTTATTTCACCAGCTTTGCAAAAACATCAAAGGACAGGTGCCTCTGAATCAGATTTTGGAACAAATGTAGCTGGGAATCTATCAAACAAAGAAAAAAGGCAGAGGAAAAAGGATTTGTCCCTGCTATCAGATGAAGTACTGGAGTCAGATGCCCCCAGAAAATGCATGCATTGTCAGGTGACAAAGACCCCACAATGGAGAGAGGGGCCTATGGGTCCCAAAACACTCTGCAATGCTTGCGGTGTTCGGTACAGGTCTGGTCGCCTCTTTCCCGAATACCGGCCAGCAGCTAGCCCAACTTTTGTAGCATCGCTGCACTCAAACTGCCACAAGAAGGTCGTGGAGATGAGAAGCAGAGGCATCCAAGGGGCTGTTGCTGTTAGGGGTTCCATGTCGGCTTCGTCAAATCTGCATGGAAGTTCTGTAGGATAA 984 0.4512 DIANMKDSWFFDNNFNGLSDEIFDDVVNFFDFPLEDVDANVVEEDLDAQFKCLEDPRFDVFSASSAGLCGKAQNEKPQLGMGFSASVSILSTVMCNGISPIKQLAMAPGPTYGIGKTIPNQNASFNGKDLHQFQMYSPVSVFESSSSSSAENSNVDRPPIPVKRARGKRQRLSSFSPLFSSPFILISPALQKHQRTGASESDFGTNVAGNLSNKEKRQRKKDLSLLSDEVLESDAPRKCMHCQVTKTPQWREGPMGPKTLCNACGVRYRSGRLFPEYRPAASPTFVASLHSNCHKKVVEMRSRGIQGAVAVRGSMSASSNLHGSSVG 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1872g00005 327 Pfam GATA zinc finger 239 272 IPR000679 GO:0006355|GO:0043565
Mupr1872g00005 327 Gene3D - 231 306 IPR013088 GO:0006355|GO:0008270
Mupr1872g00005 327 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 232 294 - -
Mupr1872g00005 327 ProSitePatterns GATA-type zinc finger domain. 239 264 IPR000679 GO:0006355|GO:0043565
Mupr1872g00005 327 MobiDBLite consensus disorder prediction 196 212 - -
Mupr1872g00005 327 ProSiteProfiles GATA-type zinc finger domain profile. 233 269 IPR000679 GO:0006355|GO:0043565
Mupr1872g00005 327 MobiDBLite consensus disorder prediction 145 168 - -
Mupr1872g00005 327 FunFam GATA transcription factor 230 314 - -
Mupr1872g00005 327 CDD ZnF_GATA 238 285 IPR000679 GO:0006355|GO:0043565
Mupr1872g00005 327 PANTHER GATA TRANSCRIPTION FACTOR 142 304 - -
Mupr1872g00005 327 SMART GATA_3 233 283 IPR000679 GO:0006355|GO:0043565
Mupr1872g00005 327 MobiDBLite consensus disorder prediction 196 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1872g00005 Mupr-Chr1872 36602 40055 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1872g00005 12 303 C2C2-Gata Transcription Factor Family AT1G08010 37.705 2.46e-52 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr1872g00005 GATA 2.4e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1872g00005 - - gmx:100778675 474.552